Flavobacterium galactosidilyticum: LNP27_07205
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Entry
LNP27_07205 CDS
T10182
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fgc Flavobacterium galactosidilyticum
Pathway
fgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LNP27_07205 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgc03019
]
LNP27_07205 (recQ)
03400 DNA repair and recombination proteins [BR:
fgc03400
]
LNP27_07205 (recQ)
Enzymes [BR:
fgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LNP27_07205 (recQ)
Messenger RNA biogenesis [BR:
fgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LNP27_07205 (recQ)
DNA repair and recombination proteins [BR:
fgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LNP27_07205 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UFH47814
LinkDB
All DBs
Position
1650265..1652460
Genome browser
AA seq
731 aa
AA seq
DB search
MNPNEIDIHKELKKYFGFSQFKGLQEQVIKSILNQQNTFVIMPTGGGKSLCYQLPALTQE
GTAIVVSPLIALMKNQVDAIRSLSSENGIAHVLNSSLTKTEIAQVKKDITSGLTKLLYVA
PESLTKEEYVNFLKKVTISFVAIDEAHCISEWGHDFRPEYRNLKHIIKQLGDVPIIGLTA
TATPKVQEDILKNLDMTDANTFKASFNRPNLYYEVRTKTKNIESDIIRFIKQHKGKSGII
YCLSRKKVEAIAEVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGID
KPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAEQE
IGFALLQEVVAYAETSMSRRKFLLHYFGEEFDDVTGEGADMDDNVRNPKTKVEAQDQVVK
LLQVVRDTKHLYKSKEVVFTLIGRVNAVIKAHRTDVQSFFGCGVGHDEKYWMALLRQVLV
SGYLSKDIETYGIVKITKKGLDFIKNPESFMMSEDHEYNEIVDGAIVTAAKSTAVADEVL
MGMLRDLRRKVAKKVGVPPFVVFQDPSLEDMALKYPVSQEEMINIHGVGEGKAKKYGKEF
LELISRYVEDNDIVRPDDLVVKSTGVNSVNKLYIIQNIDRKLALTDIASAKGLSMDALIK
EMEQIVYSGTKLNIKYWIDDMLDDDQQEEIHDYFMESESDNIEAALKEFDGDYDLDELRL
MRIKFISEVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaacgaaattgacatacacaaagaattaaagaagtattttggctttagccaa
ttcaaaggattgcaggaacaagtcataaaaagtatactgaaccagcagaatacctttgtg
attatgcccacaggaggaggaaaatcgctttgttatcaattgcctgctttaactcaagaa
ggaactgctatagtagtttcgcctctaattgctttaatgaaaaatcaggtagatgcgatc
agaagtttatcttcggaaaatggaatcgcccatgtgctaaattcttcacttacaaaaact
gaaattgctcaagttaaaaaagatattacatcaggattaactaaattgctgtacgttgcg
cctgaatcattaactaaagaggaatatgtcaattttcttaaaaaggttactatctctttc
gtagccattgatgaagcccattgtatatcagaatggggacatgattttagaccagaatac
aggaatcttaagcatattattaaacaattaggcgatgttcctatcattggcttgaccgct
actgctactccaaaagtgcaagaggatatattgaaaaatcttgatatgactgatgcgaat
acttttaaagcatcttttaacagacctaatttatactacgaagtacgtactaaaactaaa
aatatcgaatcggatattattcgtttcataaaacaacacaaaggaaaatcaggtattatt
tactgtttgagccgcaaaaaagtagaggctattgccgaggttttgcaagtcaacggaata
agtgctgtaccttatcatgcaggattagatgcaaaaactcgtgctaaacatcaagatatg
ttccttatggaagatgtagatgtagtggtagcaacgatcgctttcggaatgggaattgat
aaacccgatgtgcgttttgtgattcatcatgatattcccaaatctcttgaaagttattat
caagaaacgggacgtgcaggccgtgacggtggcgaagggcattgtttagcctattactct
tataaggatgtcgaaaaattagaaaaattcatgtcgggaaaaccagttgctgagcaggaa
ataggctttgctctgttgcaggaagtcgtggcttacgccgaaacttctatgtcaagacgc
aagtttttactccactatttcggtgaagaatttgacgatgttactggcgaaggtgctgat
atggatgataatgttcgcaatccgaaaacaaaagttgaagctcaagatcaagttgtgaaa
cttctgcaagttgtacgagatactaaacatttatacaaatctaaagaagttgtttttact
ttaattggacgtgtaaatgcagtcataaaagcgcatagaactgatgtacaatcatttttt
ggttgtggtgtaggccacgatgaaaaatactggatggctttgttgagacaagtcttagtt
tcaggttatttatcaaaagatatcgagacttacggaattgtaaaaatcacaaaaaaagga
ttggattttatcaaaaatcctgaatcttttatgatgtctgaagatcatgaatataatgaa
attgttgatggtgctattgtaacagcagctaagtcaacagccgttgctgatgaggtactt
atgggtatgttgagagacttacgaagaaaagtagctaaaaaagtgggtgttcctcctttt
gtagtttttcaagatccttcgttagaagatatggctttaaaatatcctgtttcgcaagaa
gaaatgattaatatccatggagtaggggaaggaaaagctaagaaatacggcaaagaattt
cttgaattaattagcaggtatgttgaagataatgacattgtaagacctgatgatttagta
gtaaaatcaactggtgttaattctgtcaataaattatatattatacagaatattgaccgc
aaactcgctcttacagatattgcttcggcaaaaggtttaagtatggatgctctgataaaa
gaaatggagcaaattgtttattctggaactaagttgaatattaaatattggattgacgat
atgcttgatgatgatcagcaagaagaaattcacgattactttatggaatcagagtctgat
aatatagaagctgccctaaaagaatttgatggcgactatgatcttgacgaattacgtttg
atgcgaattaagtttattagtgaagtagcgaattaa
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