Flavobacterium galactosidilyticum: LNP27_07570
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Entry
LNP27_07570 CDS
T10182
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fgc Flavobacterium galactosidilyticum
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fgc03009
]
LNP27_07570 (rimO)
Enzymes [BR:
fgc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LNP27_07570 (rimO)
Ribosome biogenesis [BR:
fgc03009
]
Prokaryotic type
ribosomal protein modification factors
LNP27_07570 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
NARF
Motif
Other DBs
NCBI-ProteinID:
UFH47883
LinkDB
All DBs
Position
complement(1723769..1725082)
Genome browser
AA seq
437 aa
AA seq
DB search
MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRASGKDVAHEAPEAEEGNIIVINTCGFI
DNAKAESINMILEYADKKERGLVDKVFVTGCLSERYRPDLEKEIPNVDQFFGTTELPGLL
KALGADYKHELLGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGKNVSQTIEKLVKES
EGLAKNGVKELILIAQDLTYYGLDIYKKRALGELLEALVKVEGIEWIRLHYAFPTGFPMD
VLEIMKREPKICNYLDIPLQHVSDSILKSMRRGTTQEKTTKLLKTFREAVPGMAIRTTLI
VGYPGETQEDFNTLKDFVQEMKFDRMGCFAYSHEENTHAYLLEDDVPDNVKQERANEIME
LQSQISWDLNQEKVGMTFKCIIDRKEGAHFVGRTEFDSPDVDNEVLIDASKYYLKTGDFA
MIKIIEATEFDLYGEPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgaagtctttaaaaaagaataaaataaatgtgatcactcttgggtgctcaaag
aatgtatatgacagtgaagtgcttatgggtcagcttcgcgcaagcggaaaagacgtagca
catgaagctcctgaagccgaagaaggcaatattattgttatcaatacttgtggattcatt
gacaatgctaaggctgagtcaataaatatgattctggaatatgctgataaaaaagaaaga
ggtttagttgataaagtattcgttacaggatgtttatctgaacgctacagacctgactta
gagaaagaaatacctaatgtggatcagttttttggaaccacagagttgccaggattatta
aaagctttaggagctgactataagcatgaattattaggagagcgtttgacaacaacccct
aaaaattatgcgtatttaaaaatctctgagggttgtgaccgaccttgtagtttttgtgct
attccattaatgcgtggaaaaaatgtttcgcaaaccattgaaaaattggttaaggaatct
gaaggtctagctaaaaacggtgtaaaagaattgattctgattgctcaagatttgacttat
tacggtttagatatatacaaaaaaagagctttaggagaattactagaagctttagtaaaa
gtagaaggtattgaatggattcgtttacattatgcattcccaactggtttcccaatggat
gttttggaaatcatgaagcgcgagcctaaaatttgtaattatttagatattccattgcaa
cacgtttcagattctatcttgaaatcaatgcgtcgtggaaccacccaagaaaaaactacc
aaattattgaaaaccttccgtgaagcagttcctggaatggctattcgtactactctgatt
gtaggatatcctggagaaacgcaagaagatttcaatactctaaaagactttgttcaggaa
atgaagtttgacagaatgggttgttttgcttattctcatgaagaaaacacacatgcttat
ttactagaagatgatgttccagacaatgtaaaacaagagcgtgcgaatgaaatcatggaa
ctgcagtctcaaatttcttgggatttaaatcaagaaaaggtaggtatgacattcaaatgt
atcatagatagaaaagaaggcgcccattttgtaggacgtactgaatttgacagtccagat
gtagataatgaagttttaatagacgcttcaaaatattatttaaaaacaggtgattttgcg
atgataaagattattgaagcaacagaatttgatttatacggagaaccagcttaa
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