Flavobacterium galactosidilyticum: LNP27_09060
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Entry
LNP27_09060 CDS
T10182
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fgc Flavobacterium galactosidilyticum
Pathway
fgc03030
DNA replication
fgc03430
Mismatch repair
fgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LNP27_09060 (dnaE)
03430 Mismatch repair
LNP27_09060 (dnaE)
03440 Homologous recombination
LNP27_09060 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgc03032
]
LNP27_09060 (dnaE)
03400 DNA repair and recombination proteins [BR:
fgc03400
]
LNP27_09060 (dnaE)
Enzymes [BR:
fgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LNP27_09060 (dnaE)
DNA replication proteins [BR:
fgc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LNP27_09060 (dnaE)
DNA repair and recombination proteins [BR:
fgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LNP27_09060 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UFH45283
LinkDB
All DBs
Position
complement(2069232..2072285)
Genome browser
AA seq
1017 aa
AA seq
DB search
MYLNCHSYHSLRYGTIPLADLVQLAVQSNVKAMALTDINTVTGIYDFIKECEAANIKPVV
GIEFRYNNKLLYIGLAKNAKGLAEMNRFLTKHNFDGTPLPNCAPEFKNVTVIYPIENAPD
SFSHFEFLGIRPEQLSLLFHAKWKEKLEKMVVLQPVTFRTKKEFNLHKILRAIDTNIILS
KLTETDYCSTSDIMIVLEELIIKFSEYPQIIKNTKNIIEECNFEFDFKTPKNKINYTESS
ENDIQLLTSLANQGLIKKYGNNNPLARARVEKELKVIHELKFSGYFLITWDIIRYSNSMG
FMHIGRGSGANSIVSYCLGITAICPLELDLYFERFLNVNRKSPPDFDIDWSWKERDAILE
YIFNRYGREHVAFCGTNVEFKYRSIFREVGKVFGLPKEELDALAKNPMQLHDSNAIVALV
QKYGMLLEKYPNQRSMHSCGILISEQPITNYTVLEMPPKGFPIVLFDMHVAEDIGFEKFD
ILSQRGIGHIDDSVKLIKKNRGIDVNIRDTELSKNESKCNAYLSIGNTIGCFYIESPAMR
GLLRRLKCDNYKTLVAASSIIRPGVAQSGMMKEYIFRHNHPEQFEYFHEVFKEQLGETYG
IMVYQEDVIKIALHFAGVPASDGDILRRAMSGKGRSAAALQKVKDNFFACCQQKRHPLAL
SQEIYRQIESFAGYSFCKAHSASYAVESYQSLFLKVNYPIEFMVAVINNQGGFYRTEVYV
HEAKMSGGIINTPCVNNSDYETTLYGIQVFLGLMHLEGLEAKVAHHIVLEREKNGKYKSL
EDFINRIPIGIEGIQLLIFIGAFHFTGQTKNQLLVIARLILVNFKPENRNLMLLQEPVKE
YQLPVLKRSPFEDAFDEIELLSFPVSCSPFELLQTKYRGDVLAKNLINYHKKTVKMLAYL
ISRKHVPTKMGAMFFGTWIDAEGNFFDTAHFPNSLKQYPFQGGGCYLLLGTVEVDYHFPT
ITISKMAKMPFIPDPRYSNSNERQYKTHQQIKEDVSMTQRAPYPQDINLPRHKMSAK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttaattgccactcctatcatagcctgcgctacggcactattccattagctgat
ttagtacaacttgcggtacaatctaatgtaaaagcaatggcattaacagacattaatacc
gttactggaatttatgattttataaaagaatgcgaagcggcaaacataaaaccagttgtt
ggaatcgaatttagatacaataataaactgctttatattggcttggctaaaaacgcaaaa
ggtctagccgaaatgaatcgttttttgactaaacataattttgatggaactcccctaccc
aattgcgcacctgaatttaaaaatgttactgtaatttatcctatcgaaaatgctcctgat
agctttagccattttgaatttttaggcatacgcccggaacaactttcgctgctttttcat
gctaaatggaaagaaaaactagaaaaaatggttgttttacaacccgttacattccgcact
aaaaaagaattcaacctgcataaaatattgcgtgctattgatactaatattattttatca
aaacttactgaaactgattattgcagtacgtcagacatcatgattgtattagaagaacta
ataataaaatttagtgaatacccacaaattattaaaaacactaaaaatatcattgaagaa
tgcaattttgaatttgattttaaaacaccaaaaaataaaatcaattatacggagagtagt
gaaaatgacatccaacttttaaccagtcttgccaatcaaggattaataaaaaaatatggc
aacaacaatccattagctagagcgagagtagaaaaagaattaaaagtgatacacgaatta
aaatttagcggttattttttaatcacttgggacattattagatatagcaatagcatggga
ttcatgcacattggtcgcggtagcggcgctaatagtattgtaagttattgtttaggtatt
accgctatttgtccgcttgaactcgatttatactttgagcgttttctaaacgtcaaccgc
aaaagtccacctgattttgacattgattggagttggaaagaacgagatgcaatcctcgaa
tatatcttcaatcgatatgggcgagaacatgttgctttttgtggaaccaatgtagagttt
aagtaccgctcgatttttagggaagtcggaaaagtttttggtttacccaaagaagaattg
gacgcccttgctaaaaacccaatgcaactgcatgacagcaatgcgatagtggcgttagta
caaaaatacggtatgttgctggaaaaatatcccaatcaacgcagtatgcattcctgtgga
atattaatttctgagcaacctattacaaattacaccgttttagagatgcctcctaaagga
tttcccatcgtactctttgatatgcatgttgccgaagatattggttttgaaaaatttgat
attttaagtcagcgcggcattggtcacattgatgattccgtaaaactgattaaaaaaaac
cgaggtatcgacgtcaacattcgcgataccgaattatcaaaaaacgaatcaaagtgcaat
gcgtatttaagtattgggaatactattggctgtttttatattgaaagtcctgctatgcgc
ggattgttgcgaaggctaaaatgtgataattacaaaacccttgtagcggcatcatcaatt
attcggcctggtgttgctcaaagcgggatgatgaaagaatacattttcaggcacaatcat
ccggaacagtttgaatattttcatgaggttttcaaggagcaattaggcgaaacctacggc
attatggtatatcaggaagatgtaatcaaaattgcacttcactttgcaggcgttcccgca
tctgatggtgatattctgcgtcgcgctatgagtggcaaaggccgatcagcggccgcatta
caaaaagtaaaagacaacttttttgcttgttgccaacaaaaaaggcatcctttagcacta
agtcaagaaatctatcgacagattgaatcctttgcaggctattccttttgtaaggcgcac
tccgcttcctatgctgtagaaagttatcaaagtttgttcttaaaagtaaattatccaata
gagtttatggtagcggttatcaacaatcaaggtggtttttatcgtacagaagtttatgta
catgaagcaaaaatgtctggtggaattattaatacaccatgcgtaaacaacagtgattat
gaaactactctatacggaattcaagtttttctaggtttaatgcatttagaagggcttgaa
gccaaagtagcgcatcacattgttttagaacgtgaaaaaaacggaaaatacaaatcgtta
gaagattttatcaatcgcattcctataggtattgaaggaattcaattattgattttcatt
ggtgcttttcattttacgggccaaacaaaaaaccaattactcgttatcgcacgattaata
ttagtgaatttcaaacctgaaaatcggaatttaatgttacttcaagaaccggttaaggaa
taccaacttccggtactaaaacgctctccctttgaagatgcttttgacgaaatagaacta
ttgagttttcctgtttcttgttcgccttttgagttattgcagactaaatatcgcggagat
gtattggctaaaaatttaataaattatcataaaaaaaccgtcaaaatgttagcctatctt
atctcccgaaaacatgttcctactaaaatgggcgctatgttttttggcacttggatcgat
gccgaaggaaatttttttgacacagcacatttccctaatagcttaaagcaatatcctttt
caaggcggaggttgttatttactattaggcactgtagaagtcgattaccactttcccact
attactatttctaaaatggcaaaaatgccttttattcctgatccgcgttattctaattct
aacgaacgtcagtacaaaacgcatcaacaaattaaagaagatgtgagtatgacacaacga
gcgccttatcctcaagacatcaatttgccaagacataaaatgagtgctaaataa
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