Flavobacterium galactosidilyticum: LNP27_11640
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Entry
LNP27_11640 CDS
T10182
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fgc Flavobacterium galactosidilyticum
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgc03032
]
LNP27_11640
03400 DNA repair and recombination proteins [BR:
fgc03400
]
LNP27_11640
Enzymes [BR:
fgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LNP27_11640
DNA replication proteins [BR:
fgc03032
]
Prokaryotic type
DNA Topoisomerases
LNP27_11640
DNA repair and recombination proteins [BR:
fgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LNP27_11640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
KN17_SH3
Motif
Other DBs
NCBI-ProteinID:
UFH45769
LinkDB
All DBs
Position
complement(2707708..2708715)
Genome browser
AA seq
335 aa
AA seq
DB search
MKKIETKIDIKHVDDEAMSIHKRKRGKGYQYFDEDGNKIKDKLLLSRFRRLIIPPMWTDV
YICKWDDGHIQAIGRDAKGRKQYIYHSEFEKSKQEEKFAKMKAFGKSLKKFRIKVLEDIA
EKEWNKNKVLALIILLLDETGIRIGNKQYVNQNGTFGLTTLRRKHITFEKNQVVFEYKGK
SNQMRHVEIDDVQLAKLIKKTSELPGYEIFRYKNDDGQFQAVDSDDVNEYIHAHMGKGFS
SKDFRTWVASRLAVELYPYAIEAIGETKKSKFSNALIRMVADELGNTPKVCRSYYVHPNI
MQKIESKSLPNKYYEDKGMKQSELTLSEKEVMKHL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatagaaactaaaattgacataaaacatgttgacgatgaagcaatgtcaatt
cacaaacgcaaacgaggaaaaggatatcaatattttgatgaagacggcaataaaatcaaa
gataaattactattgagtaggtttcgccgacttataattccgccaatgtggaccgacgtt
tatatctgcaaatgggatgatggacacatacaagccattgggagagatgcaaaagggaga
aaacaatacatttatcactcggagtttgaaaaatccaaacaagaagagaagttcgctaag
atgaaagcttttggtaaatcacttaaaaaatttaggataaaagttttagaagatatcgct
gaaaaggaatggaacaaaaataaagttttagctttaattatattacttttagacgaaaca
ggtattcgaataggcaacaaacaatatgtaaatcaaaatggaacttttggtttaactaca
ttaagaagaaaacatattactttcgagaaaaatcaggtagtttttgaatacaaaggtaaa
agcaatcaaatgcggcatgtagagattgatgatgtacaattagcaaaattaattaagaaa
acctcagaattgccggggtatgaaatctttagatataagaatgatgatggtcaatttcaa
gccgtagatagtgacgatgtaaatgaatacatacatgcgcacatgggtaaaggatttagt
agtaaagattttagaacatgggttgctagtcgtttagcagtggaactatatccttatgcc
attgaagcaattggtgaaactaaaaagagtaagttcagcaatgcgctgattcgaatggta
gcagatgagcttggtaacactcctaaagtgtgcagatcctattacgtacatcccaatatc
atgcaaaaaattgaatctaaaagtttacctaataaatattatgaagataagggaatgaaa
caatcagagcttactttatcagaaaaagaagtaatgaaacacttgtag
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