Flavobacterium galactosidilyticum: LNP27_12005
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Entry
LNP27_12005 CDS
T10182
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fgc Flavobacterium galactosidilyticum
Pathway
fgc03030
DNA replication
fgc03430
Mismatch repair
fgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LNP27_12005 (holA)
03430 Mismatch repair
LNP27_12005 (holA)
03440 Homologous recombination
LNP27_12005 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgc03032
]
LNP27_12005 (holA)
03400 DNA repair and recombination proteins [BR:
fgc03400
]
LNP27_12005 (holA)
Enzymes [BR:
fgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LNP27_12005 (holA)
DNA replication proteins [BR:
fgc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LNP27_12005 (holA)
DNA repair and recombination proteins [BR:
fgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LNP27_12005 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
UFH45841
LinkDB
All DBs
Position
complement(2792760..2793764)
Genome browser
AA seq
334 aa
AA seq
DB search
MDEVLKIVNDIKTGNIKPIYFLMGEESYYIDKLSDYIEKKVLTEEEKGFNQTVLYGRDVT
IEDIVSTAKRYPMMAERQVVIVKEAQDLLRTIDKLESYAENPMPTTVLVICYKYKSLDKR
KKVTKLIAKNGVVFESKKLYENQVGDWIKRVLAGKKYTIEPKATAMLVEFLGADLSKINN
ELEKLQIILPVGSVINPMHIEENIGFSKDFNVFELRKALGERNQLKAYTIAENFAQNPKD
NPMVVTTSLVFGFFIQLLKYHGLKDRNPKNVAAVIGVNPFFLKEYDVALKNYPMKKVSQI
VAALRDIDVKSKGVGANALSQSDLLREMLYKIFN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtacttaaaattgtaaatgatataaaaacgggtaacataaaaccaatttat
ttcttgatgggagaagaatcctattatatagataagttgtctgactatattgagaaaaag
gtacttaccgaagaggaaaaaggttttaatcaaacggttctatacggaagagatgttact
attgaagatattgtgtcgacagccaagcgatatcctatgatggcagaacgccaagttgtc
attgtcaaagaagctcaagatttacttcgaactattgacaagctggaaagttatgctgag
aatccaatgcctacaacagttttagtcatttgctataaatataaatctcttgataaaaga
aaaaaagtaaccaagctaatagcaaaaaatggtgttgttttcgaaagtaaaaaattatat
gaaaatcaagtgggtgactggatcaaacgtgttttagcagggaaaaaatacaccatagaa
ccaaaagctacagcaatgctagttgaatttttaggtgctgacttgagtaaaattaacaat
gaacttgaaaagctacaaattattcttcctgttggaagtgttataaatcccatgcatatt
gaagagaatataggctttagtaaagattttaatgtatttgaattgcgaaaagcacttggc
gaacgcaaccaattaaaagcctacactattgctgaaaattttgcccaaaacccaaaagac
aatccaatggtggtaactacgagtttagtttttggattttttatccaattgctaaaatac
catggattgaaagatcgaaatcctaaaaatgtagcggcagtgataggggtaaatcctttc
tttttaaaagaatatgatgttgctttgaaaaactatccaatgaaaaaagtgagtcaaatt
gtggctgcactgagagatattgatgtaaagagtaaaggtgtgggtgctaatgcattatca
caatctgatttattaagagaaatgctttataaaatatttaattaa
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