Flavobacterium galactosidilyticum: LNP27_12245
Help
Entry
LNP27_12245 CDS
T10182
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fgc Flavobacterium galactosidilyticum
Pathway
fgc00260
Glycine, serine and threonine metabolism
fgc00460
Cyanoamino acid metabolism
fgc00630
Glyoxylate and dicarboxylate metabolism
fgc00670
One carbon pool by folate
fgc00680
Methane metabolism
fgc01100
Metabolic pathways
fgc01110
Biosynthesis of secondary metabolites
fgc01120
Microbial metabolism in diverse environments
fgc01200
Carbon metabolism
fgc01230
Biosynthesis of amino acids
fgc01240
Biosynthesis of cofactors
fgc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fgc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LNP27_12245
09102 Energy metabolism
00680 Methane metabolism
LNP27_12245
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LNP27_12245
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LNP27_12245
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LNP27_12245
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LNP27_12245
Enzymes [BR:
fgc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LNP27_12245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UFH45888
LinkDB
All DBs
Position
complement(2851784..2853058)
Genome browser
AA seq
424 aa
AA seq
DB search
MQRDEQIFDLILEEQERQIHGLELIASENFVSDEVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDVVEQIAIDRAKELFGAEYANVQPHSGSQANTAVYHACIKPGDKILGFDLSHGGHLT
HGSPVNFSGRLYTPSFYGVDKETGLLNYDKIQEIATKEQPKLIIAGASAYSRDMDFERFR
VIADSVGAILLADISHPAGLIAKGLMNDPLPHCHIVTTTTHKTLRGPRGGLIMMGKDFPN
PFGITTPKGEVRMMSSLLDLAVFPGNQGGPLMHIIAAKAVAFGEALKDEFFTYALQLQKN
ANAMADAFVKRGYEIISGGTDNHMMLIDLRNKNISGKDAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTAAITTRGLVEADMETIVALIDRVLVDHTNEDVIEAVANEVNEMMSERA
IFVY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaaatttttgaccttattctagaagaacaagaaagacaaattcac
ggattagaactaatcgcttcagagaactttgtaagtgatgaagtaatggaagcagctggt
tctgttttaactaacaaatatgctgaaggatatcctggcaaaagatactacggaggttgt
gaagtagttgacgttgtggagcaaattgcgattgacagagccaaagagttatttggtgct
gaatatgcaaacgtgcaaccacactcaggatctcaagcaaatactgcagtttaccatgct
tgtattaaacctggagacaaaatcttaggttttgacttatctcacggtggtcaccttact
cacggttctcctgtaaacttctccggacgtttatacacaccttcattttatggtgttgat
aaagaaactggattattaaattatgataaaattcaagaaatagctactaaagagcaacca
aaattaattatagcaggagcttcggcttattctcgtgatatggattttgagcgttttaga
gtaattgctgatagtgtaggtgctattttattagctgatatttctcatcccgctgggctt
atcgccaaaggtttgatgaatgatccgttacctcattgtcatattgtaacaactacaaca
cacaaaactttacgtggtcctcgtggtggtttaattatgatgggaaaagattttccaaat
ccatttggaataacaactccaaaaggtgaagtacgaatgatgtcttctttattggattta
gctgtttttccgggaaatcaaggtggtccattaatgcatattattgctgctaaagcagta
gcttttggtgaagcattgaaagatgaattctttacgtatgctttgcaattgcaaaaaaat
gcaaatgctatggctgatgcttttgtaaaaagaggatacgaaattatttctggaggaact
gacaatcacatgatgttgattgatttaagaaacaaaaatatttctggaaaagatgctgaa
aatgcactagttaaagcagaaattacagtaaataaaaacatggttccatttgatgacaaa
tctccatttgttacgtcaggaattcgtgtaggtactgcagccattaccactcgtggtctt
gttgaagctgatatggaaactattgttgccttgatcgacagagttttagtagatcatact
aatgaagatgttatcgaagcggttgctaatgaagtaaacgaaatgatgagcgaaagagct
attttcgtatattaa
DBGET
integrated database retrieval system