Flavisolibacter ginsenosidimutans: FSB75_03800
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Entry
FSB75_03800 CDS
T06122
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fgg
Flavisolibacter ginsenosidimutans
Pathway
fgg03030
DNA replication
fgg03430
Mismatch repair
fgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FSB75_03800 (dnaE)
03430 Mismatch repair
FSB75_03800 (dnaE)
03440 Homologous recombination
FSB75_03800 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgg03032
]
FSB75_03800 (dnaE)
03400 DNA repair and recombination proteins [BR:
fgg03400
]
FSB75_03800 (dnaE)
Enzymes [BR:
fgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FSB75_03800 (dnaE)
DNA replication proteins [BR:
fgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FSB75_03800 (dnaE)
DNA repair and recombination proteins [BR:
fgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FSB75_03800 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF3112
Motif
Other DBs
NCBI-ProteinID:
QEC55062
UniProt:
A0A5B8UF50
LinkDB
All DBs
Position
921563..925195
Genome browser
AA seq
1210 aa
AA seq
DB search
MKFSHLHVHTQYSLLDGAASIQSLYKKAIDDGMPALAISDHGNMFGAFEFVSQAYKHVDE
NGKPKVKPIVGCEFYLVADRHRRQFTKEEKDKRYHQILLAKNETGYKNLVKLTSLGYMEG
LYGKYPRIDKELILKHHEGLIATTCCLGAMVPQAILAGKEEEAEKEFKWWLDLFGEDYYV
EFQRHGMAEQDKVNDVLVKFATKHNVKVIASNDSHYTDVEDFNAHDILLCINTGEKQATP
ALREFADDDVNMKDKRFAFPNDQFYFKKTAEMSKTFHDLPQALDNTNEIVDKVELLNLKR
DILLPAFPLPKEFQQHDDSNLNQWEFLKHITYEGAKERYHEITEEIRERIDFELFTIKTM
GFAGYFLIVSDFIKAGRDLGVFVGPGRGSAAGSVVAYCIGITNIDPIKYKLLFERFLNPD
RKSMPDIDTDFDDEGRQKVIDYVVEKYGKNQVAQIVTYGTMAAKSSIKDVARVMDLPLPE
SNALAKLVPEKPGTKLYRCLHAPITSKEGEKPLEDDYSSDDIENIKRLREVYNSKGLQAD
VLHIAEKLEGSVRNTGIHAAGIIIAPKDLTELIPVFASKETDLCITQIEGSIIEDSGVIK
MDFLGLKTLSIIRDALINIKEKHGVDIDIDAIPLDDAATYELYQRADTIATFQFESPGMQ
KYLKELKPDQFADLIAMNALYRPGPMAYIPQYVDRKHGREAVEYDLPEMAEYLEETYGIT
VYQEQVMLLAQKIAGFSKGDADVLRKAMGKKDRKTLDKMKSKFIDGAKEKGHKKDVLEKI
WTDWEAFAQYAFNKSHSTCYAYVAYQTAYLKAHYPAEYMAAVLNHANAIEKLTFFMEECK
RMGLTVLGPDINESQKGFAVNAEGEIRFGLGGLKGVGEAAVESIIDERKSGGVFEDPFNF
MKRINQRTVNKKTLESLIYAGAFDEFPQLHRAQYLCVPEGETQNGLEKMIRYGNVVQAES
LSTTNTLFGDLPAVLDIKPPAIPNCPPFSLTEKLEKEKEVTGIYLSGHPLDHYRFEIKYY
GITSIADFNEIKESAILAGQGRTYKMLCLVSGVNHRISRQGNKFGAFTVEDYSGKTELVL
FGDDYARYQHFFLQGSAIYLTGSFKQRWNKAEFEFKITGITLAENVKRSLTKQLCLEMDV
RNIQPEWIEFLEKNLKAFPGPSSVRITITEPKTDMKAALQTNGHGFELNTAMIQFLEKRP
EIEVKVATTV
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttcacacctacacgttcacacccaatactcattgctcgacggcgcggcctcc
atccaatcgctttataaaaaggctattgacgacggaatgcccgcgcttgccatctccgat
cacggcaacatgtttggtgcatttgaatttgtttcacaggcctataaacacgttgatgaa
aacggaaagcctaaggtaaaacccatagtgggttgtgagttttatttggtagccgaccgg
catcgccgacagtttaccaaggaagaaaaagacaagcgttatcatcagattttattagct
aaaaacgaaacgggctacaaaaatttggtgaagcttacgtcgcttgggtacatggaaggc
ttgtacggaaaatacccgcgcattgacaaagagcttattctaaaacaccacgaaggattg
attgccacaacctgttgtttaggtgcaatggtacctcaggccattttagccggaaaggaa
gaagaagccgaaaaagaattcaaatggtggctggatttattcggtgaagattattacgtg
gagtttcagcgtcatggcatggccgagcaagacaaggtgaacgacgtgttggtaaaattt
gcgacgaagcacaatgtaaaagttattgcttctaacgactcgcattatactgacgttgaa
gatttcaacgctcacgatattctgctttgcatcaataccggcgagaagcaggccactcct
gccctgcgcgaatttgccgatgatgatgtgaacatgaaggacaagcgttttgcttttcca
aatgatcagttttatttcaagaagacggcggaaatgtcgaagacctttcatgatctgccg
caggcgcttgacaataccaacgaaattgttgacaaggttgaattgctcaaccttaaacgc
gatattcttcttcccgcttttccgttgccaaaagaatttcagcaacacgatgacagcaat
ttaaatcagtgggaattccttaagcacatcacttacgaaggtgcgaaagagcgttaccat
gagattacggaagaaatccgcgaacgcatcgactttgaattgttcaccatcaagacgatg
ggctttgccgggtactttttgattgtatctgatttcattaaagccggtcgcgatttgggt
gtatttgtcggtccgggccgcggttcggcagcgggttcggtagtggcttattgcatcggc
atcacaaacattgacccgattaaatacaaattgctgtttgaacgcttcctgaatccagac
cgtaaatcaatgcctgatattgatacggattttgacgacgaaggccggcaaaaagtaatt
gattatgtagttgagaaatacggcaagaaccaggtggcgcagatcgtaacttatggtacg
atggcggccaagtcgagcatcaaagatgtggctcgtgtaatggatttacccttgcccgaa
tcgaacgcgttggccaagttggttcccgaaaaaccgggcacaaaactttaccgttgcctt
catgcgccgattacttccaaagaaggcgagaaaccgcttgaagatgattatagcagcgac
gacattgaaaacatcaaacgcctccgcgaagtgtacaacagcaaaggcctgcaagccgat
gttctgcacattgccgagaaactcgaaggttcggtacgcaacaccggcattcacgcggcg
ggcattatcatcgcaccgaaagatttaacggaactgatacccgtattcgcttcaaaggaa
acagacctctgcatcacgcaaattgaaggcagcatcattgaggatagcggcgtaatcaag
atggactttctcggattgaaaaccttgtccatcattcgcgatgcgcttatcaacattaaa
gaaaaacacggcgttgacatagacatcgacgccattccgctggatgacgcggcaacctat
gaactttaccaacgcgccgataccattgcaacctttcagtttgaaagcccgggcatgcag
aagtatctcaaagaactgaagcccgaccagtttgcggacctgattgcgatgaacgccttg
taccgtcccggtccgatggcctacattccacaatacgtggaccgcaagcacggccgcgaa
gcagttgaatatgatttgcccgaaatggccgaataccttgaagaaacctacggcatcacc
gtttaccaggaacaggtaatgttgctggcgcaaaagattgccggcttcagcaaaggtgat
gcggacgtgttgcgcaaggccatgggaaagaaagaccgtaagacgctcgacaaaatgaag
agcaagtttattgacggtgcaaaagagaaaggccacaagaaagatgtgctcgaaaaaatt
tggacggattgggaagcttttgcgcaatacgccttcaacaaatcacactccacttgctat
gcttacgtggcctatcaaaccgcctacttaaaagcacattatccggccgaatacatggcc
gcggttttaaatcatgcgaacgccattgaaaagcttaccttctttatggaagaatgcaag
cgcatgggtttaacggtgttgggtcccgacatcaacgaatcgcagaaaggctttgccgtg
aatgccgaaggagagattcgttttggtttgggtggcttaaaaggtgtgggcgaagcggcg
gtggaaagcatcattgacgaaagaaagagcggcggtgtgtttgaagacccgttcaatttt
atgaaacgaatcaaccagcgtaccgttaataaaaaaacgttggaaagcttgatttatgca
ggagcatttgacgagtttccgcaattgcaccgtgcgcaatacctgtgtgtgcccgaaggc
gaaacgcaaaacggtttggaaaaaatgattcgctacggaaacgtggtgcaggcagaaagt
ttaagcacaaccaacacgttgtttggcgacttgcccgcggtgctggacattaaaccaccc
gcaatcccaaattgtccgccgttttcacttaccgaaaaactcgaaaaagaaaaagaagtc
acgggcatttatttgagcggccatccgctcgaccattaccgatttgaaataaaatattac
ggcattacatccattgccgattttaatgaaataaaagagtcggccatcttggccggacaa
ggtagaacatacaaaatgctttgtttggtttctggtgtcaatcaccgcatttcgcggcag
ggaaacaagttcggcgcctttacggtagaagattattcgggcaaaacagaattggttttg
tttggcgatgactatgcacgttaccaacatttctttctgcagggcagtgctatttattta
acgggaagcttcaaacagcggtggaacaaagccgaattcgaatttaaaatcaccggcatc
actcttgccgaaaacgtgaagcggagtttaaccaaacagctttgcctggaaatggacgtg
cgaaacattcagccggaatggattgaatttttggaaaagaatttgaaagcttttcccggg
ccaagttccgtgcggataaccatcacggaaccaaagaccgacatgaaggcggctttgcag
acaaacgggcacggctttgaattgaacacggccatgattcagttcctggaaaaacggcca
gagattgaagtgaaagtggctacaacggtttag
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