Flavisolibacter ginsenosidimutans: FSB75_14185
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Entry
FSB75_14185 CDS
T06122
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fgg
Flavisolibacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
fgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fgg03009
]
FSB75_14185 (rlmD)
Enzymes [BR:
fgg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FSB75_14185 (rlmD)
Ribosome biogenesis [BR:
fgg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FSB75_14185 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Cons_hypoth95
PrmA
UPF0020
Methyltransf_15
FtsJ
Methyltrans_SAM
Motif
Other DBs
NCBI-ProteinID:
QEC57000
UniProt:
A0A5B8ULS1
LinkDB
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Position
complement(3389065..3390675)
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AA seq
536 aa
AA seq
DB search
MNIGQQPTDHDTEAVVKTAALSFLKEAAVDSAVFLPPVKKKKKDTVLEQVLVEAYAAEGK
SLARRDGKVIFIEGAVPGDVVDLRLGKNKKDWAEGQPLKFHVYSKERAEPFCRHFGVCGG
CQWQMLPYEKQLQYKHQQVKDNLSRIGKIQLPEFLPIVGAQEDKFYRNKLEFTFSTKEFT
PQPPKEGLPAAQPSLVENTANGAKSSESEVSALAPPTASGAGGVAGALGFHAKGFFDKVV
QIEKCWLQAEPQNALRNALRDFAFQKGYSFYDFREHKGLLRNLQFRICTTGEVMVNVVFG
EDDKKGRQEILSFVEKNFPDITTLLYTVNLKWNDSLYDQEPVVYKGKGFVEEKLEDFRFK
IGPKSFFQTNTKQGEKLYQITRHFAELNGSQTLYDLYCGTGSIGIFCSRGAKKIIGVEAI
DAAVQDAKENALLNGIGHAQFFTGDVIEVCNDDFFAAHGKPDVIITDPPRAGMHTKLVEK
ILDMEAPTVVYVSCNPATQARDLSLLDAKYAVTKVQPVDMFPHTHHIENVVQLKRR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcggccaacaaccaacggaccacgataccgaagcagttgttaaaaccgctgct
ctttcttttttgaaagaggcagcagttgattcggctgtatttttaccgcctgtgaaaaag
aagaaaaaagatacggttttagaacaggttttggtagaggcttacgcggccgagggcaag
tccctggcccgccgcgacggcaaagtgatttttattgaaggcgctgtgcccggcgacgta
gtggaccttcggttgggcaagaataaaaaggattgggccgaaggacagcccttaaaattt
cacgtctattcaaaagaaagagccgagcctttttgtcggcactttggcgtgtgcggcggt
tgccagtggcaaatgttgccctacgagaaacaactccagtacaagcaccagcaggtaaaa
gacaatctcagtcgcattggcaaaatacaattgccggaatttttaccgatagttggagct
caggaagataaattctatcgcaacaaattagagttcacctttagcacaaaagaatttacc
ccccaacctcctaaagaaggcttgccggccgcgcagccctcgcttgtcgaaaacactgcc
aatggagcaaaatcgtcggaaagcgaggtcagtgcgttggcacccccgaccgcttcaggg
gcgggtggggtagcgggtgcactgggctttcatgccaaaggcttttttgacaaagtggtg
caaattgaaaagtgctggctgcaggccgagccgcaaaatgcgcttcgcaatgcactgcgg
gactttgctttccaaaagggctacagcttttatgattttcgcgaacacaaaggcttgttg
cgcaatttgcaattccgcatctgcaccaccggcgaggtaatggtgaacgttgtgtttggc
gaagacgacaaaaaaggccggcaggaaattctttctttcgttgagaaaaactttccggac
attaccacgctcttgtacacggttaatctgaaatggaacgattcgctttacgaccaggag
ccggttgtgtacaaaggcaaaggcttcgtggaggaaaagcttgaagatttccggtttaaa
atcgggccgaagtctttctttcaaaccaacacaaagcaaggagagaaactctaccaaatc
acccgccattttgcggagttgaacggttcgcaaaccctgtatgatttgtattgcggcacg
ggcagcattggtattttttgcagccgcggcgccaaaaaaattatcggtgtggaagccatt
gacgcggctgtgcaggacgcaaaagaaaatgctttgctcaacggtattggccatgcgcaa
ttttttaccggcgatgtgattgaagtctgcaacgatgattttttcgcggcgcacggaaag
cccgacgtcatcatcaccgatccgccgcgagccgggatgcacacaaaactggtagagaaa
attttagacatggaagcgccaactgtggtgtacgtgagttgtaacccggctacgcaggca
agagacctttcgctgttagacgcaaaatacgcggtaacaaaagtgcagcccgttgacatg
tttccgcacacgcaccacattgaaaacgttgttcagctaaaaagaagataa
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