Flavisolibacter ginsenosidimutans: FSB75_20250
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Entry
FSB75_20250 CDS
T06122
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fgg
Flavisolibacter ginsenosidimutans
Pathway
fgg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fgg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB75_20250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgg03021
]
FSB75_20250
Transcription machinery [BR:
fgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB75_20250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
Phage_integr_3
HTH_Mga
HTH_40
HTH_Tnp_ISL3
DUF8450
DUF6960
HTH_24
HTH_17
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QEC58139
UniProt:
A0A5B8UPH8
LinkDB
All DBs
Position
complement(4767337..4767903)
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AA seq
188 aa
AA seq
DB search
MTIAALQELVNRIALNEDGNAYKKLFLYYHPRLLSFSYAITHSKQSSEEAVSDVFVNIWS
LRTTLPRISNFHLYLYISTKNVSLNYLARQKRTQVFSLDDVKTEFTCLSYNPEQILITAE
MFRRICAAVQSLPPKCRLIFKLVKEDGLRYKEVAELLNLSVKTVENQMAIALRKLGESVS
LQQQIFLS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgctgcactccaagaactggttaaccgcattgccttgaacgaggacggcaat
gcctacaaaaaattgtttctttattatcatccccgcctgctttctttttcctatgccatt
acccacagcaagcaatcatccgaagaagcggtatcggacgtgtttgtaaacatttggtcg
ttgcgcaccacattgccgcgtatttccaatttccatctttacctgtacatcagcaccaaa
aacgtttcgctcaattatttggcaaggcaaaaacgaacacaagttttttcgcttgatgat
gtaaagaccgaattcacctgcctctcgtacaatcccgagcaaattctcattaccgccgaa
atgttccggcgcatttgtgccgcagtacaaagcctgccgcccaaatgccggcttattttt
aagctcgtaaaagaagacggcctccggtacaaagaagtggccgaactgcttaacctctcg
gtaaagaccgtcgaaaaccaaatggccattgccttgcgcaaactgggcgaatcggtatcg
ctgcagcaacaaatctttctttcgtaa
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integrated database retrieval system