Fimbriimonas ginsengisoli: OP10G_0735
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Entry
OP10G_0735 CDS
T03038
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fgi
Fimbriimonas ginsengisoli
Pathway
fgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OP10G_0735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgi03019
]
OP10G_0735
03016 Transfer RNA biogenesis [BR:
fgi03016
]
OP10G_0735
Enzymes [BR:
fgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OP10G_0735
Messenger RNA biogenesis [BR:
fgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OP10G_0735
Transfer RNA biogenesis [BR:
fgi03016
]
Prokaryotic type
tRNA degradation factors
OP10G_0735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_2
KH-I_KHDC4-BBP
AF0941-like
KH_N4BP1_2nd
DUF3725
Motif
Other DBs
NCBI-ProteinID:
AIE84103
UniProt:
A0A068NKM1
LinkDB
All DBs
Position
complement(761657..764107)
Genome browser
AA seq
816 aa
AA seq
DB search
MIHSHEFEVGGKTLSLESGRVARQAGGAVLLGMGETVVLGVATMSEKPREGLDFLPLVCD
YEERKYAVGKIPGGFIKRGGRPSEKSILTSRLMDRPIRPLFPKGLRHDLQIIAMTFAVDQ
ECPPDVLAINAAGAALAVSDLPFNGPIAGVRVGRIDGELILFPSIQQIKESDLDLVVAGH
KGAISMVEAGASEVTEEDMIVALKFAHDAIKVICGEFEKFAKVAGKPRREVALHTIDEGL
KKTIKKDAGKDIAKALLNGDKAVRESALDDLKKDVVKQLTPKFEDKPELLKQLPEAVDTV
VKGTVRELILEKNKRPDGRGLEELRQLEAIAGILPKVHGSGLFTRGQTQVMTVATLGLPN
DAQTMDGIEEEEPKRYMHFYNFPAYSVGEVRPMRGPGRREVGHGALAERALRPMIPLDDP
NFPYTLLLISEVLESNGSTSMASVCGSTLALMDAGIQIKAPVAGIAMGLMSDGKVFKVLT
DIIGMEDFCGDMDFKVAGTRDGITALQLDTKLDGIPDEVLARALAQAKDARFKILDVIEA
EISAPRETVGDSAPTVTTININPEKIGAVIGPGGAVIKKMTAETGASIDIQQDGRVLVGG
SNAAAVQDAIARIRALTDEVAVGTEFRGPVTRIMGRGAMVEYIPGREGMVPKEHLTTKQF
GRIEEVVNIGDELNVKVHEVDGMGRINLTALGVKQTLAGLEDNETATPPPPGQGGGDRGG
RGGRDGGRDRDRGGDRGGRGGGGDRGGYRDRDRGGDRGDRGPRPDRGDRPPREEAPQRSE
PVAESVSAPEVPSSFPKRDRGGEDDDSMNARFRPRR
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgattcatagtcacgaattcgaggtgggagggaagaccctctctctcgaaagcggtcgc
gtcgccaggcaagccggcggcgctgttttgcttggaatgggcgaaactgtcgtcctcggc
gtcgcaacgatgtccgagaagccccgagaagggctagattttcttccgctcgtctgcgat
tacgaagagcgcaagtacgccgtgggcaagatcccgggcggatttatcaagcggggaggc
cgaccgagcgaaaagtcgatccttaccagccgccttatggaccggccgatccggccgctg
ttccccaagggacttcgacacgatctccagatcatcgcgatgaccttcgcggtcgatcag
gagtgtcctcccgacgtcctcgccatcaacgcggcgggcgccgcgcttgcggtaagcgat
ctcccgttcaacggcccgatcgccggcgttcgcgtcggccggatcgacggtgagctgatc
ctcttcccgagcatccagcagattaaagagagcgatctcgacctcgtcgtcgcgggccac
aagggcgcgatctcgatggtggaagccggcgcgagcgaagttaccgaagaagacatgatc
gtcgcgctcaagttcgcgcacgatgccatcaaggtcatctgcggcgagttcgagaagttc
gcgaaggtggcgggcaagccgcgacgagaagtcgcgctccacaccatcgacgagggtctc
aagaagaccatcaagaaggatgcaggcaaggatatcgccaaggcgctccttaacggcgac
aaggcggttcgcgagtccgcccttgacgacctcaagaaggacgtcgtcaagcagttgacg
ccgaagttcgaggacaagccggagcttctcaagcagcttcccgaagcggtcgataccgtg
gtcaaagggacggttcgcgagcttatcctcgagaagaacaagcgcccggacggccgaggt
ctcgaagaacttcgccaactcgaggcgatcgccggcattctgcccaaggtgcacggctcc
ggcctcttcacccgcggccagacgcaggtcatgacggttgcgacgctcggtctgccgaac
gatgcgcagacgatggacggcatcgaggaagaagagccgaagcgctacatgcacttctac
aacttcccggcttactcggtcggtgaagtacgaccgatgcgcggccccggccgacgcgaa
gtgggtcacggcgcgctcgccgagcgcgcgcttcgtccgatgattccgctggacgacccg
aatttcccctacacgctgctcctcatctccgaggttctggagtccaacggttcgacgtcg
atggcgtcggtctgcggctccaccctcgcgctgatggatgcgggtatccagatcaaggcg
ccggtcgccggtatcgcgatgggtctcatgtccgacggtaaggtcttcaaggtcctcacc
gacatcatcggcatggaagacttctgcggcgatatggacttcaaggtcgccggaacccga
gacggaatcaccgcgctccagctcgacacgaagctggacggaattccggatgaggttctc
gcccgagccctcgctcaggcaaaggacgcccggttcaagattctggacgtcatcgaggcc
gagatctccgcgccgcgagaaacggtcggcgatagcgccccgacggttaccacgatcaat
atcaaccctgaaaagatcggcgccgtcatcggcccgggcggagcggttattaagaagatg
accgccgagaccggcgcttcgatcgacatccagcaggatggccgggtgctcgtcggcggc
agcaacgccgcggcggtgcaggacgcgatcgctcgcatccgcgcactgaccgacgaagtt
gcggtcggaaccgagttccgaggcccggtcacgcggatcatgggtcgtggcgcgatggtg
gagtacatccccggacgcgaaggaatggtgccgaaagagcacctcaccaccaagcagttc
ggccggatcgaggaagtcgtcaacatcggcgacgagctcaacgtcaaggtgcacgaggtc
gacggcatgggccgaatcaacctcaccgccctcggcgtgaagcagacgctggctggtctc
gaggataacgagacggcgactcccccgcctcccgggcagggtggcggcgatcgcggtgga
cgcggtggtcgcgacggcggccgagatcgagatcgcggcggcgaccgtggtggtcgtggc
ggcggtggagaccgaggcggctatcgcgatcgagatcgcggcggcgaccgaggcgatcgt
ggtccccgaccggatcgcggcgatcgtcctccccgcgaggaagctcctcagcggagcgag
ccggtagccgagtcggtcagcgccccggaagttcccagcagcttcccgaagcgcgatcgc
ggcggcgaggatgacgacagcatgaacgcccgcttccgcccccggcggtag
DBGET
integrated database retrieval system
