Fimbriimonas ginsengisoli: OP10G_1973
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Entry
OP10G_1973 CDS
T03038
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fgi
Fimbriimonas ginsengisoli
Pathway
fgi03420
Nucleotide excision repair
fgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OP10G_1973
03430 Mismatch repair
OP10G_1973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgi03400
]
OP10G_1973
Enzymes [BR:
fgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OP10G_1973
DNA repair and recombination proteins [BR:
fgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OP10G_1973
MMR (mismatch excision repair)
Other MMR factors
OP10G_1973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIE85341
UniProt:
A0A068NPG6
LinkDB
All DBs
Position
complement(2118002..2120215)
Genome browser
AA seq
737 aa
AA seq
DB search
MSATLDLDTLNPEQREAVLHPGGPLLIFAGAGSGKTRVITYRIARLLQEGVPSHRILAVT
FTNKASREMRERVTELVGDVAKNMWIGTFHSLCARILRIDGKAIGLDPNFVIYDDGDQLS
LIREVFKAKNIDDKSIQPRGVLNEISSAKEKLKSPEQYAKGATGFFERIVADVYKSYNAL
LSKANALDFDDILYFVNRLFEQRADVLEKYQDRFLHVLVDEYQDVNFSQYNVVHSIAAKH
RNVVVVGDDDQSIYAWRGADVSLILKFGSDYPDAKIVKLERNYRSTKTILAAANEVIKRN
RGRARKELWTENQDGVPITLTQAGTEQDEGMMVADAILKDTRIGRRKYSDYAILYRTNAQ
SRVMEEAFLTMRIPHILVGGQRFYERKEIKDMLSYLRLAFNPRDDVSFRRCINTPTRGIG
ATALSKIEEWAAERGLPLSAAVSDQEVQSGLPKKTASAVRDFYAVISEAQAIAEQGPVTP
VLKSLMSGSGYIDALKAEHSQEALGRLENLQEMLNVTAEYDASSDEPSLGGFLESVSLVA
DVDALGTAGGEAVTLMTLHSAKGLEFPVVFMTGMEEGVFPHSRSLSTDSELEEERRLAYV
GMTRAREELHLMHAHRRSLYGTPNFNRRSRFLDDIPSELLDTLNPGGYQPTMRQPIAHGP
GTHRTMEPTSAVPTPRPAPSSWKPPFNVGQRVRHPKFGIGVVVACNPVRDDVEVTVAFPG
VVGVKKLVQKLAKLEAV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctacgctcgacctcgataccctaaatccggagcagcgcgaggctgtgctccac
ccgggaggtccccttctcattttcgccggcgccggctcgggcaagacgcgcgtcatcacc
taccggatcgcccgcttactgcaggagggcgtgccgtcgcatcgcatcttggccgtcact
ttcaccaacaaagcctcgcgcgagatgcgggagcgggtgaccgagctggtcggcgacgtc
gccaagaacatgtggatcggcaccttccactccctctgcgcccgcatcctccgaatcgat
gggaaggcgatcggcctcgatcccaacttcgtgatctacgacgacggcgaccagctttcg
ctgatccgcgaggtgttcaaagccaagaatatcgacgacaagagcatccagccccgcggc
gtcctcaacgagatctccagcgccaaggagaagttgaagtcgcccgagcaatacgcaaaa
ggcgcgaccggcttcttcgagcgcatcgtcgccgacgtttacaagtcgtacaacgctctc
ctcagcaaggcgaacgcactcgatttcgacgatatcctctacttcgtcaaccgcctgttc
gagcaacgggcggacgtattggagaaataccaagaccggttcctccacgtccttgtggac
gagtatcaggacgtcaacttttcgcagtacaacgtcgtccactccatcgccgcgaagcat
cgtaatgtcgttgtagttggcgacgatgaccagtcgatctacgcttggcgtggagccgac
gtgtcgctcattctgaagttcgggagcgactatccggacgcgaagatcgttaaattggag
cggaattaccgctccaccaagacgatcctcgccgccgccaacgaagtgatcaagcggaac
cggggccgagctcggaaagagctatggacggagaaccaggacggcgttccgatcaccctc
acccaagccggaacggagcaagacgagggaatgatggtcgcggacgcgatcctgaaagac
actcggatcggccgccgaaagtactccgactacgcgatcctctaccgaaccaacgcccag
agccgcgtcatggaagaggcttttctcaccatgcgcattccgcacatcctggtgggcggc
caacggttttacgagcgcaaggagatcaaggacatgctctcctatctccgcctcgctttc
aacccgcgcgacgacgtatcgttccggcgctgcatcaatacgccgacccgcggcatcggc
gctaccgcactttcgaagatcgaggagtgggccgcggagcggggacttcccctctcggcg
gcggtttccgatcaggaagtgcagtccggcctcccgaagaaaaccgcttccgcggttcgc
gatttctacgccgtgatctcggaagcccaggcgatcgcggagcagggcccggtcacaccg
gtgctcaagagcttgatgagcggatcgggctacatcgacgccctaaaagcggagcactcg
caggaagcgctgggccggctcgagaaccttcaagaaatgctcaacgtgacggccgagtac
gacgcgtcgtcggacgagccgtcgctcggaggcttcctcgaaagcgtgtccctcgtcgcc
gacgtcgatgctctcggcaccgcgggcggagaagcggtcaccctcatgacgctccactcc
gccaaagggctagagtttccggtcgtcttcatgaccggcatggaggaaggggtcttcccg
cactcccggtcgctgagcaccgatagcgagctagaggaggagcgacgcctcgcttacgtc
ggcatgacgagggctcgcgaagaactccacttgatgcacgcccaccggagatccctctac
ggtacgcccaacttcaaccgccggtcgcggttcttggacgacatcccgagcgagctgctc
gacaccctcaacccgggtggctatcagccgacgatgcggcagccgatcgcccacggaccg
ggcacccatcggacgatggagccgacctccgccgtacccacccctcgcccggccccttct
tcctggaagcctccattcaacgtgggtcagcgagttcgccatccgaaattcggaatcggc
gtcgtcgtcgcctgcaacccggtccgggacgacgtcgaagttaccgtcgccttcccgggg
gttgtgggtgtgaagaaactggttcagaagctcgccaaactggaagcggtttag
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