Fimbriimonas ginsengisoli: OP10G_2388
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Entry
OP10G_2388 CDS
T03038
Name
(GenBank) type IB DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fgi
Fimbriimonas ginsengisoli
Brite
KEGG Orthology (KO) [BR:
fgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgi03032
]
OP10G_2388
03400 DNA repair and recombination proteins [BR:
fgi03400
]
OP10G_2388
Enzymes [BR:
fgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OP10G_2388
DNA replication proteins [BR:
fgi03032
]
Prokaryotic type
DNA Topoisomerases
OP10G_2388
DNA repair and recombination proteins [BR:
fgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OP10G_2388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AIE85756
UniProt:
A0A068NQP2
LinkDB
All DBs
Position
complement(2563041..2564102)
Genome browser
AA seq
353 aa
AA seq
DB search
MSVPEVVESVEQAGLVYVTDAMPGISRRREGDGFAYVWPDGRRVKEEQTLQRIRSLAIPP
AYESVWICPQENGHLQATGKDTKGRKQYRYHPRFRETRDASKYDRMSEFASALPKIHARL
EHDLSLRGLPRDKVLAVLIHLLERSLIRVGNEEYAKSNHSYGLTTMLNRHVKVEGSEVRF
SFLGKSKIRHRIALHDRRLARVVRRLQDLPGQELFQYLDENGDRHSVTSTDVNAYLKEIS
GGDFTAKDFRTWAGTVLALTELAGAEPPATKREAKATVTRVLKTVAAQLGNTPAVCRKCY
VHPAVLEAYAEGTLLEVLSQDDRCESPSRAIQCVEDAVKRLLGSHHRQLDRAA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcccgaggtggtggagtcggttgagcaagcggggctggtctatgtaaccgat
gcgatgccaggaatttcgcggaggcgcgagggggatgggttcgcctacgtatggcccgac
ggccggagggtgaaagaagagcagacgcttcagcgcattcgttcgctcgcgattccgccc
gcttacgagagcgtatggatctgtccgcaagagaacggtcacttgcaggcgaccggaaag
gatacgaaggggcgcaagcagtatcgttatcacccgcggttccgcgaaacgagagacgcc
tccaagtacgatcggatgtctgagtttgcttcggctttgccaaaaatccatgcccggctc
gaacacgacctttccctgcggggcctccctcgcgacaaggtcctggccgtgttgattcat
ctcttagagagaagcctaatccgagtcggaaacgaggagtacgccaagtccaaccactcc
tatggcctaacgaccatgcttaaccgccacgtcaaggtggaagggagcgaggtccgtttc
agttttcttgggaagagtaagattcgccatcggattgcgttacatgaccgtcgcctggct
cgcgtcgtgaggcgcctgcaagatcttcccggccaagagctctttcagtacctcgacgag
aatggagaccgccactccgtgacttccactgacgtcaacgcctacctcaaagaaatctcc
ggaggggacttcaccgccaaggatttccgaacatgggccggcaccgttctcgccctaacc
gagcttgccggcgccgagccgccggccaccaagcgcgaagcgaaggccaccgtcacgcgg
gtcctgaagacggtcgccgcgcagcttgggaatactcccgcggtttgccggaaatgctac
gtgcaccccgccgtgctcgaagcttacgccgagggcacgctgctcgaggtcctgagtcaa
gacgaccggtgtgaatccccttcccgggcgatccagtgcgtggaagacgcggtcaagcgg
ctacttggaagccaccatcggcagctcgaccgagccgcgtaa
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