Fimbriimonas ginsengisoli: OP10G_3802
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Entry
OP10G_3802 CDS
T03038
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fgi
Fimbriimonas ginsengisoli
Pathway
fgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OP10G_3802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgi03019
]
OP10G_3802
Enzymes [BR:
fgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OP10G_3802
Messenger RNA biogenesis [BR:
fgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OP10G_3802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
AIE87170
UniProt:
A0A068NWN0
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Position
4182392..4183624
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AA seq
410 aa
AA seq
DB search
MTAKTTESTTSFADLGLSARTLTAVTREGFTQPTPIQQAAIPAGLSGRDVIGIAQTGTGK
TLAFGLPMLERVLNDGVGLVLAPTRELALQIEETLRRVGSSFGIRTAVLIGGAPMGRQIS
LLRSRPHVIIATPGRLLDHLTQNTIRLDQVSVAVLDEADRMLDMGFLPAIRKILLRVPAK
RQTMLFSATMPPEIAKLANEFQQNAIRVEVAPAGTTAELVDQELHLVPQIDKLSFLEKLL
GDNSGTILVFARTRHGAKKVAKQVRLMGHSAAELHSDRTLAQRKAALEGFKHGTYRVLVA
TDIAARGIDVKQISVVVNFDLPDQPEDYIHRIGRTGRAGETGRAITIATPEQVGEVRRIE
RLIGRHLLPSSVRPAESAHGHFGANRGPSNRFPRPRAPQAQRRTPQTARR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaagacaaccgaatccacaacttcctttgcagacctgggcctttccgcccgc
actctaactgccgtcacccgcgaaggattcactcaaccgacccccattcagcaagcagcc
atccccgccggactttccggccgagatgtcatcggcatcgctcagaccggcacgggtaag
acccttgccttcggtcttccgatgctggagcgtgtgctgaacgacggcgtgggtctcgtt
ctcgcgccgacgcgcgagttagcactgcaaattgaagagacgctccgacgcgtcggctct
agctttggcatccgcactgccgtgctgatcggcggcgcccctatgggccgccagatctcc
ctgcttcgtagccgcccgcacgtgatcattgccacgccgggccgccttctggatcacttg
actcagaacaccatccggctcgaccaagtgtcggtcgccgtattggacgaagcggatcgg
atgctcgatatgggattcctccccgcgatccgcaagattcttcttcgggttccggcgaag
cgccagacgatgctgttctcggcgacgatgccgcccgagatcgcgaagctcgccaacgag
tttcaacagaatgcgattcgagtggaggtcgcccccgcgggtaccaccgcggaactcgtc
gatcaagagctgcaccttgttccgcagatcgacaagctgagtttccttgagaagctgctc
ggagataactccggcacgatcctcgtcttcgctcgaacccgacacggcgccaagaaggtt
gccaaacaggttcggctcatggggcactccgccgcggagcttcactccgaccggactctg
gcccagcgaaaggcggctctcgaggggttcaaacacgggacctatcgagtgctcgtggcg
acggacatcgctgcccgaggcatcgatgtcaagcagatctcggtggtcgtaaacttcgac
cttccggaccagccggaggattacatccaccgtatcggccgaacgggtcgagccggtgag
actgggcgagcgattacgatcgcgactccggagcaggtcggagaggttcggcgcatcgag
cgcctgatcggccggcatctcctcccctcctcggtccgcccggccgaatcggcccatggc
cacttcggcgccaaccgcggcccgtccaaccgcttcccgcgcccgcgcgcgcctcaggcg
cagcgccgcacgccgcaaactgccaggcgataa
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