Fimbriimonas ginsengisoli: OP10G_4075
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Entry
OP10G_4075 CDS
T03038
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fgi
Fimbriimonas ginsengisoli
Pathway
fgi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fgi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OP10G_4075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgi03021
]
OP10G_4075
Transcription machinery [BR:
fgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OP10G_4075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AIE87443
UniProt:
A0A068NV86
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All DBs
Position
4446747..4447712
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AA seq
321 aa
AA seq
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MEAGAAPVTDDPAAEPADDDLLELDAAEEEAEESEETPRVHDDSEELEMWMRQTRRAQLL
TPEQEVDLARKVQAGDMYAKKVLIESNLRLVVSIAKKYNARGIPLADLIQEGNLGLIRAV
EKFDWRKGFRFSTYATWWIRRAIARAIINQGRTIRIPVYVAELINKVVKTASRLQQELQR
EPTEDEISREVGLSVDRVREMMRVAVEPISLETPVGEKDNSSIGDFVQSQNMPSPGDVTW
TLIRREEIDGILGRLTSRERDVVRLRFGLDDGRSRTLEEVGSELNVTRERVRQIELRAMK
KLRHIGQELTSQGFTITPTPT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtggaggctggggcggcccccgtcacggacgatccagcggcagaaccggcggatgacgat
cttcttgaattagacgccgcggaagaagaggccgaagagtccgaagaaacccccagggtt
cacgacgactccgaggagctcgagatgtggatgcggcagacccgccgcgcccagctcctt
actcccgaacaggaagtcgacctcgcccgaaaggtgcaggccggcgacatgtacgcgaag
aaggtgctcatcgagagcaacctccggctcgtggtgtcgatcgccaagaagtacaacgcc
cgcggtattccgctcgcggacctgatccaagaggggaatctcggccttattcgcgccgtc
gagaagttcgactggcgcaaggggttccgcttcagcacctacgcaacgtggtggattcgc
cgcgccatcgcccgcgccatcatcaaccagggacgcaccatccgcatcccggtttatgtg
gccgagctgatcaataaggtcgttaaaaccgccagccgcctccaacaggagctgcagcgg
gagccgaccgaagacgagatcagccgcgaggttgggctgtcggtagaccgtgtacgcgaa
atgatgcgcgtggcagtggagccgatttcgctcgaaaccccggtcggtgagaaagacaat
tcgtccatcggagacttcgtccagtcgcagaacatgcccagcccgggcgacgtgacttgg
acgctgatccggcgggaagagatcgatggcatcctcggtcggctcacgagccgcgagcga
gacgtcgttcgccttcgcttcggtctcgacgacggccgcagccgcaccttggaagaggtc
ggcagcgagttgaacgtcacccgtgagcgcgttcggcaaatcgagctccgagcgatgaag
aagcttcgccacatcggccaggagctaacttcgcaaggattcaccatcacgcccaccccc
acgtaa
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