Fimbriimonas ginsengisoli: OP10G_4610
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Entry
OP10G_4610 CDS
T03038
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fgi
Fimbriimonas ginsengisoli
Pathway
fgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OP10G_4610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgi03021
]
OP10G_4610
03019 Messenger RNA biogenesis [BR:
fgi03019
]
OP10G_4610
Transcription machinery [BR:
fgi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OP10G_4610
Messenger RNA biogenesis [BR:
fgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OP10G_4610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
ATPase_2
OB_RNB
AAA_22
NACHT
Spore_III_AA
AAA
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIE87978
UniProt:
A0A068NWT3
LinkDB
All DBs
Position
complement(5006727..5008100)
Genome browser
AA seq
457 aa
AA seq
DB search
MTHQFRPRKSGGRNRGRNREGLPKNDPQADLELLPEKDYNHFDQMTPAALLKEAKAAKLD
AKILLRHELIERLLPIVNQDKEAVYAKGVLDLMSDGWGFLRRDNYQSSPEDVYVSQSQVK
KFNLRCGDTVFGQVRLPKEGEKYRGMLRVESINNFATQSIEIMRRKLFDELTPLYPNEKI
SMETVPDNIPGRMIDLLSPIGKGQRGLIVSPPKAGKTTMMKTIANAVTANHPEVYLMVLL
VDERPEEVTDMRRSVRGQVISSTFDEPAENHMRVAELCLEQAKRLVEVGRDVVILLDSLT
RLSRASNLTINPSGRTLTGGLDPSAMYRPRRFFGAARNIEEGGSLTIVSSVLVDTGSKMD
EAIFEELKGTGNMEIILDRDLSDRRIWPAVDVRRSSTRHEELLFRKEDLDGIVQLRRLMA
KEQSSIDATEGLIKLLKRTPSNAVFLESVIARTKATV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcagtttcgaccccgaaaatccggcggccgcaatcgcggacgcaaccgcgaa
ggcctaccgaagaacgatccgcaagccgatttagagctgcttccggaaaaggattacaac
cactttgaccagatgacgccggcggcgttgctgaaggaagcgaaagcggccaagctggac
gccaagatccttctgcgccacgagctcatcgagcggcttctgcccatcgtcaaccaggac
aaggaagcggtttacgccaagggcgtactcgaccttatgtccgacggctggggctttctc
cgccgcgacaattaccagtcttctcccgaagacgtctacgtgtcccagtcgcaggtgaag
aagttcaaccttcgctgcggtgacaccgtcttcggccaggtgcgcctgccgaaagaaggg
gagaagtaccgcggcatgctccgcgtcgagagcatcaacaatttcgcgacccagtcgatc
gaaatcatgcgacggaagctgttcgacgagctgacgccgctctatccgaacgagaagatc
tcaatggaaacggtgccggacaacattccgggccggatgatcgaccttctgtcgccgatc
ggcaagggccagcgcggcctcatcgtctctccgcccaaggctggaaagacgacgatgatg
aagacgatcgccaacgcggtcacggcgaaccacccggaagtctatttgatggttctgctg
gtggacgagcggccggaagaagtcaccgatatgcggcgctcggtgcgcggccaggtgatc
tcctccacgttcgacgagccggcggagaaccacatgcgggtcgccgagctctgcttggag
caggcgaagcgcctggtggaagttggacgcgacgtcgtgatcctgctcgactcgctcacc
cgcctttcgcgggccagcaaccttacgatcaacccgtccgggcgtacgctgaccggcggt
ctcgacccgagcgcgatgtatcgtccccgccgtttcttcggcgcggcgcgaaacatcgaa
gaggggggatcgctgacgatcgtttcctcggttctcgtggacaccggctccaaaatggac
gaagcgatcttcgaagagctgaagggaaccggcaacatggaaatcatcctcgaccgcgac
ctttccgatcgtcgaatctggccggcggtggacgttcgccgaagctcgacccggcacgag
gagctgttgttccggaaagaagacctggacggcatcgttcagcttcgccgcctcatggcg
aaagagcagagctcgatcgacgcgaccgaggggctcatcaagctgctcaagcgcacgccg
tcgaacgcagtgttcctcgagagcgtcatcgcccgcacgaaggcgactgtctag
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