KEGG   Flavobacterium gilvum: EM308_00245
Entry
EM308_00245       CDS       T04609                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fgl  Flavobacterium gilvum
Pathway
fgl02024  Quorum sensing
fgl03060  Protein export
fgl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fgl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    EM308_00245
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EM308_00245
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EM308_00245
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fgl02044]
    EM308_00245
Enzymes [BR:fgl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     EM308_00245
Secretion system [BR:fgl02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   EM308_00245
  Eukaryotic Sec-SRP protein
   EM308_00245
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin nSTAND3 CLP1_P cobW AAA_22 AAA_17 CbiA AAA_33 APS_kinase DUF5693 AAA_31 AAA_24 KTI12 NPHP3_N KAP_NTPase 6PF2K ATPase ATP_bind_1 TsaE AAA_18 NACHT ArsA_ATPase DO-GTPase1 AAA_16 AAA_14 MMR_HSR1 SeqA_N
Other DBs
NCBI-ProteinID: AOW08066
UniProt: A0AAC9N4D8
LinkDB
Position
complement(48859..50211)
AA seq 450 aa
MFDNLSDKLDKAFHILKGHGKITEVNVAETLKEVRRALLDADVNFKIAKDFTTKVKDKAI
GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGVNLSGNPSIILMSGLQGSGKTTFSGKLA
NYLQTKKNKKPLLVACDIYRPAAIQQLYVVGDSIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDKEMMDEIAKVHQAIQPQETLFVVDSMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMDAIDVFYPNRMAERILGMGDVV
SLVERAQEQYDEEEARKIQKKIAKNEFGFDDFLSQIQQVKKMGNMKDLVGMIPGASKAMK
DIEIEDDAFKHIEAIIHSMTPIERSKPAIIDVKRKARIAKGSGTKIEQVNQLMKQFDQMS
KMMKMMQGPGGKNLMKMMGGMKGMPGGMPR
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgtttgataatttaagcgataaactggacaaagcctttcatatattaaaggggcacgga
aaaatcaccgaagtaaacgtagccgaaactttgaaagaagtgcgtcgtgccttactcgat
gccgatgtcaattttaaaattgccaaagattttactaccaaagtaaaggacaaagcaata
ggtcaggatgtattgacaacgttgcagccgggacaattattggtaaagttagtcaaagat
gagcttacagaattgatgggtggagatgttgcgggagtcaatctttctggaaatccttca
attatattgatgtcgggattacaaggatctgggaaaactactttctctggtaaactggct
aattatcttcaaacaaaaaagaataaaaaaccacttttggttgcctgtgatatttatcgt
ccggcggcgattcagcaattgtatgtcgttggggattcaataggagttgaggtttactct
gagccagaaaataaaaatccagttgaaattgctcaaaatgcaatcaaacacgcaaaagcc
aacggatttaatgttgtgattgtcgatacggccggtcgtttggctgtcgataaggaaatg
atggacgaaattgccaaagtgcaccaagcaatccaaccacaagaaactctttttgttgtg
gattccatgactggtcaggacgcagtgaatacagctaaagcatttaacgatatcttgaat
tttgacggggttattttgaccaaattagatggtgatactcgtggaggagctgcaatttct
atcaaatctgtggtgaacaaaccaattaagtttgtaggtactggtgagaaaatggatgcg
attgatgttttctacccaaatcgtatggctgagcgtatccttggtatgggagacgttgtg
tccttggtagaaagagctcaggagcaatatgatgaagaggaagccagaaaaattcagaag
aaaattgcaaaaaatgaatttggttttgatgatttcctatcgcagattcagcaagtgaag
aaaatgggtaatatgaaagacttggtaggaatgataccaggtgcttccaaagccatgaaa
gatatcgaaattgaagacgacgctttcaaacatattgaagcaattatccattcgatgacg
cctatcgaaagaagtaagccggcaataatcgatgtaaaaaggaaggctaggattgccaaa
ggttccgggaccaaaatcgaacaagtgaatcaattgatgaagcagtttgaccaaatgagc
aagatgatgaagatgatgcagggcccaggaggaaaaaacctgatgaaaatgatgggcgga
atgaaaggaatgccaggcggaatgccaagataa

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