Flavobacterium gilvum: EM308_02310
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Entry
EM308_02310 CDS
T04609
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fgl
Flavobacterium gilvum
Pathway
fgl03030
DNA replication
fgl03430
Mismatch repair
fgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EM308_02310
03430 Mismatch repair
EM308_02310
03440 Homologous recombination
EM308_02310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgl03032
]
EM308_02310
03400 DNA repair and recombination proteins [BR:
fgl03400
]
EM308_02310
Enzymes [BR:
fgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EM308_02310
DNA replication proteins [BR:
fgl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EM308_02310
DNA repair and recombination proteins [BR:
fgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EM308_02310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOW08424
UniProt:
A0AAC9I173
LinkDB
All DBs
Position
complement(545148..549674)
Genome browser
AA seq
1508 aa
AA seq
DB search
MYLIFDTETTGLPKKWGAPISDTDNWPRCIQIAWQLHDDMGKLIEHQDYLVKPEGFNIPY
DAERIHGISTELAEAEGVSLVEVLEKFNIALGKAKFIVGQNLGFDVNIMGCEFYRMGVES
PMGFMPILDTCTEVTASLLKLPGGRGGKFKLPTLTELHEYLFEVPFAEAHNATADVEATT
RCFLELIRRDIFTKEELDVDSGYFLDFKNKNPHEFELIGLKHINLKEASDKIRLQFGEKQ
AFSVSKEELADNKKVLVDAAFAHLHNHTQFSVLQSTIGIGNLVSATAKNKFPAVAMTDTG
NMMGAFHFVSAVMNHNKAASGKNKELVEKGEEPTETEIKPIVGCEFNICENHLDKSKKDN
GYQVVLLAKNKKGYHNLAKMASIAYVDGFYYVPRIDRTIVEKYKEDIMVLSGNLYGEIPS
KILNIGENQAEEALIWWKEQFGSDLYLEIMRHNQEDENRVNQTLISFSQKHNVKLIATNN
TYYVNKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYYKSEEEMKKLFADLPE
AITNIQEIIDKVEGYSLYRDVLLPKYDIPEEFIDPEDEKDKGVRGENAYLKDLTMKGAKK
RYGEITPEIQERLDFELLTISNSGYPGYFLIVQDFIAEARKMGVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGLVMDYVINKYGANQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPAMMPSKWNLARFISESEDDVKKALKSSE
EFDRVKELIGIANEDDLAGETIQQAKVLEGSLRNTGIHACGVIITPDDITNFVPVTTAKD
SDLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRTGIDLNPDDFPIDDVKTY
ELFQRGETVGVFQYESPGMQKYMKDLKPTVFADLIAMNALYRPGPLEYIPSFVRRKNGEE
EITYDLDACEEYLSETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKQKDVLDKMK
GKFIDQAVAKGHDDKKLDKIWTDWEAFASYAFNKSHSTCYAWVAYQTAYLKAHYPAEYMA
AVLSNNMNDIKQVSFFMEECKRMGLQVLGPDVNESFYKFTVNDDYAVRFGMGAIKGVGSG
AVETIVENRKTGKYKSIFDLTKRIDLRAANKKAIENLALAGGFDSFEGTTRAQYFHDDGD
GITFYEKAMRYGSKFQENENSSQVSLFGETSEVQIAEPVVPPCEDWSTMEKLAKEKEVVG
IYISGHPLDDYKFEMKYFCNAKLESLKNLEAFVGKNLAFGGIITNVQHRVAKNGKGWGTF
MLEGYDESYEFKIFGEEYLKFRHFFIQNNFTFLKVLVKEGWVNQDTGKRTEPRIQFAEVK
QLQDVLSTFAKKLILLLNIRDLEAEFIHKLSRLFQEHKGDNTVSFEIMELEKIKRIVETV
PEFTENDEEAFVDESEEATEMVETKSITEVEEIKVVTKLSMPSRKLKIQISNELLFELEK
MQINFKLN
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatattcgataccgaaaccacaggattacccaagaaatggggtgcacccatt
tctgacaccgacaactggccaagatgtattcaaatcgcttggcagttgcatgacgatatg
gggaaactcatcgagcatcaggattatttggtaaaacccgaaggatttaatattccctat
gatgccgagcgtatccacggaatctccaccgaattggcagaagccgagggagtttccttg
gtcgaagttttggagaaattcaatattgctttaggcaaagccaaatttattgtgggtcag
aatcttggttttgacgtcaatattatgggctgtgaattctacagaatgggagttgaaagt
ccaatgggtttcatgccgattcttgatacctgtaccgaggttaccgcttctttgctaaaa
ttacccggaggacgtggtggaaaattcaaattaccgactttaacagaattacacgaatat
ttatttgaagttccttttgcggaagcgcacaacgccaccgccgacgttgaagccacaaca
cgctgtttcttagaattaatccgcagggatatttttaccaaagaagaactcgatgttgat
tccggttactttttggatttcaaaaacaaaaacccacatgaatttgagttaatcggttta
aaacacattaacttaaaagaagcgtctgataagattcgtcttcaatttggtgaaaaacaa
gcgttttcggtttccaaagaagaacttgcggataataaaaaagtattggtagatgcggct
tttgcgcatcttcataatcatacccagttttcggttctgcaatcgacaatcgggattggg
aatttggtttcggctacagccaaaaacaaatttccggccgtggcgatgactgatacggga
aatatgatgggggcttttcactttgtgagtgccgttatgaatcacaacaaagcagcttcc
ggaaaaaataaggaattggttgaaaaaggcgaagaaccaacagagaccgaaatcaagcct
attgtgggttgcgaatttaatatctgtgaaaaccatttggataaatccaaaaaagacaat
ggatatcaagtggttttgttggccaaaaacaaaaaaggctatcataatttggcaaaaatg
gcttcgattgcctacgttgacggtttttattatgtgccaagaatcgacaggacaattgtc
gaaaaatataaagaagacattatggttttgtctgggaatttatacggagagattccgagt
aaaatcctaaacattggtgaaaaccaagccgaagaagccttgatttggtggaaagaacaa
tttggttccgatttgtatcttgaaataatgcgccataatcaggaagatgaaaacagggtg
aaccaaactttgatttcgttttcgcaaaagcacaatgttaagttgattgcgaccaacaat
acctattatgtaaataaggaagatgccaatgcgcacgatattttgttgtgtgtaaaagac
ggcgaaaaacaggcgacgcctattggccgcggacgtggttaccgttacggtttgcctaat
caggaatattattataaatcggaggaggaaatgaaaaaactcttcgccgatttacccgaa
gcgattaccaatattcaggaaataatagataaagttgaagggtattcgctctatcgcgat
gtattgcttcctaaatatgatattccagaggagtttattgatccggaagatgaaaaagat
aaaggagtccgtggagaaaatgcctatttaaaggaccttactatgaaaggggccaaaaaa
agatacggcgaaattactccagagattcaggagcgtttggattttgaattgctcacgatt
tccaattctggttatccgggttacttcttgattgttcaggatttcattgccgaagctcga
aaaatgggtgtttctgttggaccaggtcgtggatcggctgcgggatctgcggtggcgtat
tgtttaggaattaccaatattgaccccataaagtatgatttgctttttgagcgtttcctg
aatccggatcgtgtgtcgatgcccgatattgatatcgattttgatgacgaaggccgtggt
ttggttatggattatgtaatcaataaatacggtgccaatcaggtggcgcaaattattact
tatggtaaaatggcaaccaaatcggccattcgtgatacagcgcgtgtgttggatttgcca
ttgtttgaagccgatcgtattgcaaaattgattccagcgatgatgccatccaaatggaat
ttggcgcgtttcattagcgaaagcgaagatgatgtaaaaaaagcgctgaaatcatcagaa
gaatttgatcgtgtcaaagaattgattggtattgccaatgaagatgatttggcgggagaa
accattcagcaggcgaaagttttggaaggctcgcttcgaaatacagggattcatgcgtgt
ggagtgattattactccggatgatattaccaatttcgttccggtaaccacagcaaaagat
tccgatttatatgtaactcagtttgacaactcggttgccgaaagtgccggattgttaaaa
atggacttcttgggtctgaagaccctgactttgataaaagacacggtaaaattggtaaaa
taccgaaccggaatcgatttgaatcctgatgattttccgattgatgacgtcaaaacgtat
gagctttttcagcgtggagaaaccgttggggtgttccagtacgagtcacccggaatgcaa
aaatacatgaaggatttgaagccgacagtttttgccgatttgattgcgatgaatgccttg
tatcgtccggggccattggagtatattccttcttttgttcgtcgaaaaaatggcgaagaa
gaaattacgtatgaccttgatgcctgcgaagaatatttatctgaaacttatggaattaca
gtttaccaagaacaggtaatgcttttgtcccaaaagttggccggattctcaaaaggtgat
gccgacgttttgcgtaaagcgatgggaaaaaagcaaaaggatgtcttggataaaatgaaa
gggaaattcatcgatcaggccgttgcaaaaggccacgatgataagaaactggataaaata
tggacagactgggaagcttttgcgagttatgcctttaataaatcacactctacctgttac
gcctgggtggcttatcaaacagcgtatttaaaagcgcattatccagccgaatatatggcg
gcggtgctttctaataatatgaacgatattaaacaggtttcgttttttatggaagaatgt
aagcgtatgggattgcaggttttgggtccagatgttaatgaatccttttataaattcacc
gtaaacgatgattatgcagtccgttttgggatgggagcgattaagggagtaggttccgga
gctgtagaaacaattgtagaaaacagaaaaacaggaaaatacaaatctatttttgatttg
accaagcgtattgatttgcgcgctgccaataaaaaagcaatcgaaaacctggcgcttgcc
ggaggttttgattcgtttgaaggaacaacgagagcgcaatattttcacgatgatggtgat
ggaattaccttttatgaaaaagcgatgcggtacggttcgaaatttcaggaaaatgagaat
tcatcgcaggtaagtttatttggtgaaaccagcgaagttcagattgccgagcctgttgtg
cctccatgtgaagactggagcacgatggaaaaattggctaaagaaaaagaggtggttgga
atttatatttcaggacatccgcttgacgattacaaatttgagatgaaatatttttgtaat
gccaaattggagtctttgaaaaatctggaagcattcgtagggaagaatttagcatttgga
ggaataattaccaatgtgcagcaccgtgtggcaaagaatggaaaggggtggggaaccttt
atgttggagggttatgatgagagttatgaattcaaaatttttggtgaagagtacttgaag
ttcaggcatttctttatccaaaataattttacctttttgaaagtgcttgtaaaagagggc
tgggtcaatcaggatacagggaaaagaacagagccaagaatacagtttgccgaggttaag
caattacaggatgtcttgagtacttttgctaaaaaactgattctgttactcaatataaga
gatcttgaggcggagtttattcataaactaagccgtttgtttcaggaacacaaaggcgat
aatacggtttcatttgaaatcatggagctcgaaaaaataaaacgaatagttgagaccgtt
cctgaatttactgagaatgatgaagaggcttttgtggatgaaagtgaagaggcaactgaa
atggttgaaacaaagtccatcacagaagttgaagaaataaaagtcgttaccaaattatcg
atgccgagcagaaagctgaaaattcaaatttcgaatgaattgttatttgaattagaaaaa
atgcagataaattttaaactaaattga
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integrated database retrieval system
