Flavobacterium gilvum: EM308_05670
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Entry
EM308_05670 CDS
T04609
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fgl
Flavobacterium gilvum
Brite
KEGG Orthology (KO) [BR:
fgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fgl03016
]
EM308_05670
Enzymes [BR:
fgl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EM308_05670
Transfer RNA biogenesis [BR:
fgl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EM308_05670
Prokaryotic type
EM308_05670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AOW09035
UniProt:
A0AAC9I2Z8
LinkDB
All DBs
Position
complement(1352159..1352857)
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AA seq
232 aa
AA seq
DB search
MTTEDFLNGQVLLIDKPLHWTSFQAVNKIKYLLINKAGLPKKFKIGHAGTLDPLASGLLL
ICTGKFTKRITELQGQPKEYTGTFHIGATTPSYDLETEIDETFDISHIDESLIHETVKQF
LGEIDQKPPIFSAIKKDGKRLYEHARAGEEVEIASRKTTIHEFEITRIALPEIDFRVVCS
KGTYIRSLAYDFGKAMNSGSHLTALRRTKIGDYNVADAVDVTLFEQSLFPQL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgaagattttttaaacggccaagtccttttaatcgacaaacctttacattgg
acttcttttcaggcggtcaataaaatcaaatatttgctaatcaacaaagcgggtttaccc
aaaaaattcaagattgggcacgcaggaactttggatcctttggcgagcggtttattatta
atctgtacgggaaaattcaccaaaaggattaccgaattgcaaggccaaccaaaagaatac
actggaactttccacattggagccactactccatcctacgatttggagacagaaatagat
gaaactttcgacatttcacatatcgacgaatcacttattcacgaaaccgtaaaacaattt
ttgggcgaaattgatcaaaaaccacccattttttcggctataaaaaaagacggaaaacga
ctttatgaacacgccagagcgggagaagaagttgaaattgcttcaagaaaaactactatt
cacgaatttgaaatcacccgaatcgctcttcctgaaatcgattttagggtagtttgcagc
aaaggaacttatatccgttccctagcttatgattttggaaaagctatgaattccggttcg
catttaacagctttgcgtcgtaccaaaattggtgattacaatgtagcagatgctgtagat
gttaccctgttcgaacaaagtctatttcctcaattgtaa
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