Flavobacterium gilvum: EM308_06230
Help
Entry
EM308_06230 CDS
T04609
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fgl
Flavobacterium gilvum
Pathway
fgl03030
DNA replication
fgl03410
Base excision repair
fgl03420
Nucleotide excision repair
fgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EM308_06230
03410 Base excision repair
EM308_06230
03420 Nucleotide excision repair
EM308_06230
03440 Homologous recombination
EM308_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgl03032
]
EM308_06230
03400 DNA repair and recombination proteins [BR:
fgl03400
]
EM308_06230
Enzymes [BR:
fgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EM308_06230
DNA replication proteins [BR:
fgl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EM308_06230
DNA repair and recombination proteins [BR:
fgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EM308_06230
NER (nucleotide excision repair)
GGR (global genome repair) factors
EM308_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOW09135
UniProt:
A0AAC9I3V5
LinkDB
All DBs
Position
complement(1483512..1486409)
Genome browser
AA seq
965 aa
AA seq
DB search
MSAQKRLFLLDAYALIFRGYFAFIKNPRINSKGMDTSAIMGFMNALMDVIKREKPDHLAV
AFDKGGSTYRYEMYQEYKAHRDETPEAIKIAVPYIQELLKAMHIPIIEVPGFEADDLIGT
LAKQAEKEDFKVFMVTPDKDFAQLVSENIFMYKPARMGNDIEIWGIPEVLEKFEIERPEQ
VIDYLGMMGDAADNIPGLPGVGEKTAKKLLKEFGSMENLLANTHQLKGAIKDKIEANADK
GILSKKLAAILLDCPVQFNAADYELSKPDVEKTDELFQELEFRQMKTQFDKFFGTGKEYD
EIDTNGNGNINGNDNINGNDNINDNEKIVKKVSAKKSNEDQFDLFGFSDEETGEVKSNSH
YATLENTEHFYQSIQGDFAVKLLLQNLLQQTSVCFDTETTGIDALNAELVGMSFSYEKGK
AFYVPFPENQVEAQALADKFKPFFENENIEKIGQNVKYDLKILSNYGVQIKGKLFDTMIA
HYLINPDMRHNMDVLSETYLKYSPKSIEDLIGKKGKGQKSMREVALEDIKEYAAEDADIT
FQLKQNFSPILDKAETKKLFEEIEIPLIPVLAAMELEGINLDVPFLKSMSVEMAAESNAL
EQKIYETAGEKFNLASPKQLGDILFEKLKIGGAKQKKTKTGQYATGEEVLSYLANDNEIV
RDILEWRQMVKLQSTYIDALPTQVDSKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTE
RGRLIRKAFVARDENYTLVSADYSQIELRIIAALSGEENMIKAFQNKEDIHRSTAAKVFH
IGLDEVTKEQRSNAKTVNFGIIYGVSAFGLSNQTSLSRKESAELIDAYYTTYPKLKSYMS
NQVDFARKHGYVQTISGRRRYLKDINSANAVVRGAAERNAVNAPIQGSAADIIKIAMINI
HKKLTTENWKSKMLLQVHDELVFDVHNSELEKIKPMIKYEMENAFKMDVPLDVEIGSGKD
WLEAH
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaaaaacgactttttctactcgacgcttacgcgcttatctttcgtggttat
tttgcctttataaaaaacccaagaatcaattccaaaggaatggacacatcggccattatg
ggatttatgaatgcattaatggatgtaatcaaaagagaaaaacccgaccatcttgcagta
gctttcgacaaaggcggaagcacgtatcgctacgaaatgtatcaggaatacaaagcacac
cgcgatgaaacccccgaagccataaaaattgccgttccttatattcaggaattattaaaa
gcaatgcacattccgattattgaggttccgggatttgaagccgacgacttgattggaact
ttggcaaaacaagccgaaaaagaagatttcaaagtctttatggtaactcctgataaagat
tttgcccaattagtttcagagaatatttttatgtacaaacccgcaagaatggggaacgac
atcgaaatatggggaatcccagaggttttagaaaaattcgaaatagaacgtcccgaacaa
gtaatagattaccttggaatgatgggcgatgccgccgataatattcctggattacctgga
gttggcgaaaaaacagccaaaaaattactcaaggaatttgggtcaatggaaaaccttttg
gcaaacacccaccaattaaaaggcgccataaaagacaaaattgaagccaatgcagacaaa
ggtattttgtccaaaaaactagccgctatcctactcgattgtccggttcagtttaatgct
gccgactacgaattatcaaaacccgatgtcgaaaaaacagacgaattatttcaggaactg
gaattccgtcaaatgaaaacgcagtttgacaaattctttggaaccggaaaagaatatgac
gaaatagacactaatggtaatggaaatatcaatggcaatgacaatatcaatggcaatgac
aatatcaatgacaatgaaaaaatagttaaaaaagtttccgctaaaaaatccaacgaagac
caatttgatttattcggtttttccgatgaagaaaccggcgaggtaaaatcaaattcgcat
tacgcgactttagaaaataccgaacatttttatcaaagtattcaaggtgattttgccgta
aaattacttttgcaaaatttacttcaacaaacttcggtttgtttcgacaccgaaactacc
ggaattgatgctttgaacgctgaacttgttggaatgtcattctcgtatgaaaaaggaaaa
gcattttatgttccgtttcctgaaaatcaggtagaagcacaagctttggcggacaaattc
aaacctttctttgaaaatgaaaacatcgaaaaaattggtcaaaacgtaaaatacgattta
aaaattctttcgaattatggtgttcaaataaaagggaaattgtttgacacgatgattgcg
cattatctaatcaatcccgatatgcgccacaatatggacgttttatcggaaacctatttg
aaatattcaccaaaatccatagaagatttaattggcaaaaaaggaaaaggtcaaaaatca
atgcgtgaagtcgccttggaagacatcaaagaatacgccgccgaagatgccgacattacc
tttcaattaaagcaaaattttagcccgattctcgacaaagccgaaaccaaaaaattattc
gaggaaatcgaaatcccgttaatcccggttttggccgcaatggaattggaagggatcaat
ctcgacgttccctttttaaaatcgatgtctgttgaaatggctgccgaaagcaatgcattg
gaacaaaaaatatatgaaactgctggtgagaaattcaatttggcttccccaaaacagttg
ggcgatattttattcgaaaaattaaaaattggcggagccaaacaaaagaaaaccaaaacc
ggtcaatatgccactggcgaagaggttttatcctatctggccaatgacaacgaaattgtt
cgtgacattctcgaatggcgtcaaatggtcaaactgcaaagtacttatatcgatgcactt
cccacacaagttgactccaaaacaggtcgcgttcacaccgattatatgcaaaccgttgct
gcaacgggacgtttgagttcgaacaatccgaacttgcaaaacatcccaatccgtaccgaa
agaggacgattaatccgaaaagcttttgttgcccgtgacgaaaattacactttggtttct
gcggattattcgcaaatagaattgcgtattatcgctgctttatctggagaagaaaacatg
attaaagccttccaaaacaaagaagacattcacagaagtactgctgcaaaagttttccat
attggattagatgaagtaacaaaagaacaacgaagcaacgccaaaacggtgaacttcgga
attatatatggtgtttcggcatttggattgagtaaccaaacctcgctttcgcgaaaagaa
agtgcggagttgattgatgcttattacacaacttacccgaaattaaaatcatacatgtct
aatcaagtggattttgcccgaaaacatggttacgtacagactatttccggaagaagacgt
tatttgaaagatatcaattcggcgaatgccgttgtccgtggtgcagcagaacgaaatgct
gtaaacgctccaattcaaggaagcgccgccgacatcatcaaaattgcgatgattaatatc
cacaaaaaattaacgactgaaaactggaaatctaaaatgttgcttcaggttcatgatgag
cttgtgtttgatgtccacaattcggaactcgaaaaaatcaaaccgatgattaaatacgaa
atggaaaacgccttcaaaatggatgttccattggatgttgaaataggttcaggaaaagac
tggctggaagcacattga
DBGET
integrated database retrieval system
