Flavobacterium gilvum: EM308_07220
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Entry
EM308_07220 CDS
T04609
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fgl
Flavobacterium gilvum
Brite
KEGG Orthology (KO) [BR:
fgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgl03032
]
EM308_07220
03400 DNA repair and recombination proteins [BR:
fgl03400
]
EM308_07220
Enzymes [BR:
fgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EM308_07220
DNA replication proteins [BR:
fgl03032
]
Prokaryotic type
DNA Topoisomerases
EM308_07220
DNA repair and recombination proteins [BR:
fgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EM308_07220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Poly_export
Motif
Other DBs
NCBI-ProteinID:
AOW09315
UniProt:
A0AAC9I472
LinkDB
All DBs
Position
1719481..1722000
Genome browser
AA seq
839 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSEYQVESSYGHIADLPSKEIGVDVENGFTPKYEVSSDK
KALVAKLKTLAKNAEMVWLASDEDREGEAISWHLAEELKLKKEKTKRIVFHEITKSAILK
AIEKPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EIQNFTAVATYSVVAEFTNEAGKTFKAKLPKNFNTKKDAEEFLKQNIGSIYKVADLETKP
TKKSPAAPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKEAMDAA
QAEIIKSYGKEYANPRTFANKSKGAQEAHEAIRPTDMSLHNVNIDRDQARLYDLIWKRTL
ASQMSDAKLERTNVKIDANNHVEQFTASGEVLLFEGFLKVYLEGHDDEEEEQEGLLPALK
VNEKLQNNYITATERYSRAAARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGN
LEGVERNYTQLTLQSGKVGEKLLKENTGSDKGKLVPTDIGAIVTDFLVKNFGNILDYNFT
AKVEHDFDEIAEGNIEWTKMMQEFYNKFHPTVKDVEANADRESGERILGIDPASGKPVSV
RLGKFGPMAQIGDSEDDDKKFASLRQEQNIGNITLEEALNLFLLPKNLGLYKGEEVEVSN
GRFGPYVRHGSVFVSLPRGEDPLDVTMARAQELIDEKAAADAPIAIYKGESVQKGTGRFG
PFIKWNGIFINVSKKYNFDNLSKADIEELIEDKLQKNIDKVLHNWEEEGILVEKARWGRS
VITKGKIKIELSKDVDATKLTLAEVQDMIAKKTPAKKVAAKKSTTAKKPVAKKTVAKKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtgatagttgagtccccagcgaaggctaaaacaatcgagaaattt
ctaggaagtgaatatcaggtagaatcaagttacgggcatatagccgatttgccttctaag
gaaattggcgttgatgtcgaaaatggatttactcccaaatatgaagtttcttcggataaa
aaagcattagtagccaaattgaagactttagccaaaaatgccgaaatggtttggttagca
agtgatgaagatcgtgagggagaagctatttcctggcacttggcagaagaactaaaacta
aaaaaagaaaaaacaaaacgtattgtttttcatgaaataactaagtcagctattcttaaa
gctattgaaaaaccacgtgagattgattataatttagttaatgcacaacaagcccgaaga
gttttggatcgtttggttggttatgaattgtcaccagtactttggcgaaaagtgaaaggc
ggtttgtctgccggacgcgtgcagtcggtttctgttcgattaattgttgaaagagagcgc
gaaattcaaaacttcactgcagttgctacgtattctgttgtggcagaatttacaaatgaa
gcaggcaagacttttaaagccaagcttccaaaaaattttaacaccaaaaaagacgccgaa
gaatttttaaaacaaaatatcggttctatatataaggtagcagatttggaaaccaaacct
accaaaaaatcaccggcagctccttttacaacttcgactttgcaacaggaagcagctaga
aaattgtatttacccgttggaatcacaatgcaattggcgcaacgattgtatgaagcgggg
cttattacttatatgagaacggacagtgtgaacttgtccaaagaggcgatggatgcggca
caggccgaaattatcaaatcgtacggaaaggaatatgcaaatccacgaacttttgccaat
aaaagcaaaggagcgcaagaggctcacgaagcaattcgtcctacagatatgtcacttcat
aatgtaaatattgacagagatcaagcgcgtttatatgatttgatttggaaaaggaccttg
gcttcgcaaatgagtgatgccaaattggaacgtaccaatgtgaaaatagatgcgaataat
cacgtggaacaatttaccgcatctggagaggtattgctttttgaaggatttttgaaagtg
tatcttgaagggcacgatgatgaagaggaagagcaagaaggtttgttgcctgctctgaaa
gtgaatgaaaaattacaaaacaattatattaccgcaaccgaaagatattcaagagctgca
gccagatataccgaagcatctttggtgaaaaaactggaagaattgggaattggtcgtcca
tctacttatgcaccaacaatttctaccatcatcaacagaaattatgttgagaaaggaaat
ctggaaggtgttgaacgtaattatacgcagttgactttgcaatctggtaaagtaggcgag
aagttgctgaaggaaaacacaggttcggataaagggaaattagttcctacagacattggt
gccattgttaccgatttcttggtgaagaactttgggaatattttggactataatttcaca
gcaaaagttgaacatgattttgatgaaatagccgaaggaaatatcgaatggaccaaaatg
atgcaagagttctacaataaatttcacccaactgtgaaagatgtagaagccaatgctgat
agagaaagcggagagagaatattaggaattgatcctgcgtctggaaagccggtttctgtt
cgtttgggtaaatttggaccaatggctcaaataggtgattctgaagatgatgataaaaaa
tttgcgagtctaagacaagaacaaaatattggtaatattaccttggaagaagcattgaat
ttatttttgcttcctaaaaatttaggtttgtacaaaggggaagaagtcgaagtgagtaat
ggtcgttttggtccgtatgtacgccacggaagtgtttttgtttctttgccaagaggagaa
gatccgttggatgttactatggcaagagctcaagaattaatcgatgaaaaagccgccgcc
gatgctcctatagctatttataaaggagaaagcgttcaaaaaggaactggtcgttttggc
ccttttatcaagtggaacggaatttttataaatgtaagcaagaaatataattttgataat
ttgtccaaagcagacattgaagaactgattgaagataaattgcagaaaaacattgataaa
gtactccataattgggaagaagaaggaattttggttgaaaaagcccgttggggacgttca
gtaataacaaaagggaaaatcaaaattgaattaagtaaagatgttgatgcgactaaattg
acattggcagaggttcaggatatgattgccaagaaaacacctgctaaaaaagttgccgcg
aaaaagtcaacaacagcaaaaaaacctgttgctaaaaaaacagttgccaaaaagaaataa
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