Flavobacterium gilvum: EM308_11950
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Entry
EM308_11950 CDS
T04609
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fgl
Flavobacterium gilvum
Pathway
fgl03420
Nucleotide excision repair
fgl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EM308_11950
03430 Mismatch repair
EM308_11950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgl03400
]
EM308_11950
Enzymes [BR:
fgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EM308_11950
DNA repair and recombination proteins [BR:
fgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EM308_11950
MMR (mismatch excision repair)
Other MMR factors
EM308_11950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
ResIII
nSTAND3
AAA_11
ERF
Oscp1
Motif
Other DBs
NCBI-ProteinID:
AOW10159
UniProt:
A0AAC9I4C8
LinkDB
All DBs
Position
complement(2853222..2855567)
Genome browser
AA seq
781 aa
AA seq
DB search
MQKYIEQLNEAQRQPVLQKDGPMIIIAGAGSGKTRVLTIRIAYLMHQGVDPFNILALTFT
NKAAREMKKRISDIVGASEAKNLWMGTFHSVFARILRSEAEHLGYPSNFTIYDSQDSLRA
ISGIIKEMQLDKDIYKPKQVLSRISSFKNSLITVKAYFNDPDLQEADAMSKKPRMGEIYK
NYVDRCFKSGAMDFDDLLLKTNELLTRFPEVLAKYQNRFRYLLVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVKTFRLEQNYRSTKNIVEAANT
IIDKNKVKLDKVVWTANEFGPKIKVHRSITDNEEGRFVASTIWEQKMNHQMNNGEFAVLY
RTNAQSRAIEDALRKRDIPYRIYGGLSFYQRKEVKDVLCYLRLVVNPKDEEALIRVINYP
ARGIGNTTIEKLTIAANHYKRSIFEVMQNIERIDLKLNSSTKNKLLDFVTMVQSFQVINE
NQDAFYLTDHVAKKTGLIQELKKDATPEGMARIQNIEELLNGIKDFTEGQKEVDGARGSL
AEFLEDVALATDLDKDTSDEDRVALMTIHLAKGLEFPHVFIVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLTDSDPSRFIEEINGQYLEYLTAPENNY
RYKPMIDSDIFGDVDKSKLRLAKPVGSTPPKHITDNEPKSDINLRKLKPVSSGPAINSAT
GNANLFDNKLVAGNVVMHERFGKGQVINLEGIGADKKAEIKFEVGGLKKLLLRFAKLEII
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatatatagaacagctcaacgaggctcaacgtcaacccgtactgcaaaaagat
ggtcctatgattattattgcgggtgccggatcggggaaaactcgtgtacttaccatcaga
atcgcttatttaatgcatcaaggtgttgatccattcaatatattggcgcttacttttacc
aacaaagcagcccgggaaatgaaaaaacgtatctcggatattgttggcgcaagcgaggcc
aaaaacctatggatgggaacttttcactctgtttttgcccgaattttacgttccgaagcc
gaacatttgggctatccatcaaactttacaatctatgattcgcaagattctttacgtgcc
atttcgggtattatcaaagaaatgcaattggataaagatatttacaaacccaaacaggtt
ttgagcagaatttctagttttaagaatagtttgattaccgtaaaagcctatttcaacgac
cccgatttacaagaagctgatgcgatgagcaaaaaacctagaatgggagaaatctacaaa
aactatgtggatcgatgctttaagtcgggtgctatggattttgatgatttattattaaaa
accaatgaattactgactcgtttccccgaagttctggcaaaatatcaaaaccgttttcga
taccttttggtagatgagtaccaagataccaatcattctcagtaccttattgttcgcgct
ttatctgataaatttcagaatatttgcgtagtaggggatgatgctcagagtatttacgcc
ttccgcggagcgaatatcaataacattctgaacttccaaaaagattatgaaggcgtaaaa
acctttagattggaacaaaattaccgttcgaccaaaaatattgtggaagctgccaatact
attattgacaaaaacaaagtaaaactagacaaggtggtttggaccgccaatgaatttggt
ccaaaaataaaagtacaccgcagtattactgataatgaagaaggccgttttgtggcgagt
acgatttgggaacaaaaaatgaatcaccaaatgaacaatggtgaatttgctgttttatat
cgtaccaatgcacaatcccgagccattgaagacgctttgcgaaaaagagatattccgtac
agaatttatggtggattgtctttttaccaaagaaaagaggtcaaagatgtgttgtgctac
cttagattggttgtaaacccaaaagatgaagaagcgttgattcgtgttataaactatcct
gcgcgcggtatcggaaacacaacaattgaaaaactgacaattgctgcaaatcactacaaa
cgttcaatttttgaagtgatgcaaaatattgaacgaattgacttgaaactaaattcgtcg
accaaaaataaattgcttgattttgtaacaatggttcaaagttttcaggtgattaacgaa
aatcaggatgcgttttaccttactgatcatgtagccaaaaaaacaggtttgattcaggaa
ctaaagaaagatgcgactcccgaaggaatggctcgtattcagaatattgaagaattattg
aacgggataaaggattttactgaaggtcaaaaagaggttgacggtgctcgtggttcattg
gcagaatttctggaagacgtagcactagccaccgatttggataaagatacgagtgatgaa
gatcgtgttgctttgatgactatccatttggccaaaggacttgaatttcctcatgtgttc
attgtaggaatggaagaagatttgttcccaagcgccatgagtatgagtacccgaagtgag
cttgaagaagagcgacgtttattctatgtagccttaacccgtgcggagcatcaggcgtat
ttaacgtatgcgcaatcccgttaccgctggggaaaactgactgatagcgacccctcccgt
tttattgaggaaataaacggacagtatctggaataccttacggctcccgaaaacaattac
cgctacaagccaatgattgacagtgatatttttggtgatgtggataaatccaaattgcgc
ttggcaaaaccggttggaagtactcctccaaaacacattacagataacgaaccaaaatcg
gatattaatttacgtaaactgaaacctgtttcgagcggtcctgcaattaattctgcaact
ggaaacgctaatttatttgataataaactggttgctggaaatgtagtaatgcacgaacga
tttgggaagggacaagtcatcaatctcgagggaattggagccgacaaaaaagccgaaatc
aaatttgaagttggtggcttaaaaaaattattgttacgctttgcaaaattagaaatcata
ggttag
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