Fusobacterium gonidiaformans: C4N16_02100
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Entry
C4N16_02100 CDS
T05460
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fgo
Fusobacterium gonidiaformans
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fgo03016
]
C4N16_02100
Enzymes [BR:
fgo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C4N16_02100
Transfer RNA biogenesis [BR:
fgo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C4N16_02100
Prokaryotic type
C4N16_02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVQ16395
LinkDB
All DBs
Position
379888..380625
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AA seq
245 aa
AA seq
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MKNIKISYQYDGSSFMGFQRQPEKRTVQGEIEKCLFRILKEKIDLTSSGRTDRGVHAMHQ
VSNFFTAVNIPLDKLFYALSHCLPEDILLLELEEARKDFHARFSAKTRSYCYRITWKKSP
FERRYKTYVKKKIDSQSFFKILEIFMGKHNFQNFRLQDDAFANPIREIYSIQVKEVDEGM
DIYIEANAFLKSQIRIMLGTAFQVYFQKVESNRIEKMLKEPDKEFPKYLADPNGLYLYHI
KYDEE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatcaaaatatcatatcaatatgatggaagctcttttatgggttttcaaagg
cagccggagaaaagaacggtacaaggggaaattgaaaaatgtctttttcgtattttgaaa
gaaaagatagatttaacctcctctggacgaacggatcgaggggtacatgctatgcatcag
gtttctaatttttttactgcagtcaatatacccttggataagttgttttatgctttgagt
cattgcctgccggaagatattttacttttagagttggaagaagcaaggaaggactttcat
gctcgcttttctgcaaaaacaaggtcatattgttatcggattacttggaaaaaaagtcct
tttgagcgtcgatataagacttatgtgaaaaaaaagatagattctcaatctttttttaag
atattagaaatttttatgggaaaacataactttcaaaattttcgtttgcaagatgatgcc
tttgcgaatccgataagagaaatatattctattcaagtaaaagaagtggatgagggaatg
gatatttatatagaggctaatgcttttttaaaatcacagattcgtatcatgttgggaact
gcttttcaggtatattttcagaaagtagaatcgaatcgaattgagaaaatgttgaaagaa
ccggacaaggaatttccaaagtacttggcagatccgaatggcttatatttgtatcatatt
aaatatgatgaggaataa
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