Fusobacterium gonidiaformans: C4N16_03215
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Entry
C4N16_03215 CDS
T05460
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fgo
Fusobacterium gonidiaformans
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgo03400
]
C4N16_03215
DNA repair and recombination proteins [BR:
fgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C4N16_03215
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
GvpD_P-loop
nSTAND3
DnaB_C
AAA_14
nSTAND_NTPase5
ABC_tran
DUF7125
AAA
AAA_22
AAA_16
AAA_24
NTPase_1
DUF7129
RecA_N
AAA_19
ATPase_2
AAA_29
AAA_5
NB-ARC
DAP3
NACHT
RsgA_GTPase
DUF4310
Zeta_toxin
MCM
MeaB
AAA_28
AAA_30
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AVQ16596
LinkDB
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Position
591190..592572
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AA seq
460 aa
AA seq
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MAKTKSVYYCTECGYQSAKWLGRCPSCQEWGTFEEEVALPKELQKQFHSSSSSGNLGEKV
KALSEVTMESSERYTTSMGEFDRVLGGGLLQGEVVLLTGNPGIGKSTLLLQVASCYTEYG
DVIYISGEESPSQIKNRSERLGIDEKGLLLFTETDILSIYEYLLKKKPKVVMIDSIQTIY
NSALDSISGTPTQIRECTLKIIELAKTYGISFFVVGHITKDGKVAGPKILEHMVDAVFNF
EGEEGLYYRILRSTKNRFGSTNELAVFSMEEDGMKEIKNSSEYFLSEREEKNIGSMVVPI
LEGTKVFLLELQSLLTDVSIGIPKRVVQGYDRNRLQILIAIAERKLYLPLGMKDVFINVP
GGLNISDPAADLALLISMLSAYHSVEISQKIAAIGELGLRGEIRKVFFIEKRLRELEKLG
FKGVYVPEANRKELEKKQYHLKIIYLKNLEELLERIKEGR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacaaagtctgtttattactgtaccgagtgtggatatcagtctgcaaaatgg
ttaggaagatgtccttcctgtcaagaatggggaacttttgaggaagaagttgctcttcct
aaggaattacaaaaacaatttcatagtagttcttcttccgggaatttgggagagaaagta
aaggctttgtctgaagttaccatggagtcaagtgaacgatacacgacgagtatgggagaa
ttcgatcgagtattgggaggaggactattacaaggagaagtagtgctactaacaggaaac
cccggaatagggaaatctaccttattactacaagtagcttcttgttatacagaatatgga
gatgttatctatatttcaggagaggaatctccttcccaaataaaaaatagaagcgaacga
ttaggaattgatgagaaaggtttgcttttatttacagaaacggacattttatcgatttat
gagtacttattaaaaaagaaacctaaggtagttatgattgattctatacaaactatctat
aattctgcactagattctatttcggggacaccgacacagattcgagaatgtaccttaaaa
attatagagctggcaaaaacttatggaatttctttttttgtggtaggtcatatcacaaaa
gatgggaaggtagcaggtcctaaaattttagaacacatggtagatgctgtttttaatttt
gaaggagaggaaggattgtattaccgtattttgagaagtacgaaaaatcgttttggttct
acgaatgaattagctgtttttagtatggaagaagatgggatgaaagaaattaaaaattct
tctgagtattttttaagtgaaagagaagaaaaaaatattggaagtatggtagtacctatc
ttagaaggaactaaagtatttttattagaattacaatctttgctgacggatgtaagtata
gggattcctaaacgagttgttcagggttatgataggaatcgattacaaattttaattgca
attgcagaaagaaaactgtatcttcccttaggaatgaaagatgtttttatcaatgtgccg
ggtggattaaatatttcagaccctgcagcagacttagcacttttgatttctatgttatct
gcatatcattctgttgaaattagtcaaaagattgcagcgattggagaattaggacttcgt
ggagaaatacgaaaagtcttttttatagaaaaaagattgagggaattggaaaaattaggt
ttcaagggtgtctatgtgccggaggcaaatcgaaaagaattagagaaaaagcaataccat
ttaaaaattatttatttaaaaaatctggaagaacttctagaaagaattaaggagggaaga
tga
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