KEGG   Fusobacterium gonidiaformans: C4N16_03765
Entry
C4N16_03765       CDS       T05460                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fgo  Fusobacterium gonidiaformans
Pathway
fgo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fgo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C4N16_03765 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fgo03019]
    C4N16_03765 (rny)
Messenger RNA biogenesis [BR:fgo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C4N16_03765 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_NusA_2nd KH_KhpA-B ATP-synt_B KH-I_KHDC4-BBP Exonuc_VII_L DUF4407
Other DBs
NCBI-ProteinID: AVQ16702
LinkDB
Position
698568..700133
AA seq 521 aa
MNLILGIGLGVFGLAIAFALIYKKMVIDKQIQTLNNLEDEVAKSKIKAKEILESAEKEAV
SKGKEIELKAKERAYSLKEEAEKEIRNSKNEILQKEARLAKKEETLDHKIEKLENKSQEL
EKTTEELEQKREEIETVKKEQEAELERITGLTKAEAKDILIAKLKEELTHDNALAIREFE
NKLEDEKDRISRRILSTAIGKAAADYVADATVSVVNLPSDEMKGRIIGREGRNIRSIEAL
TGVDIIIDDTPEAVVLSSFDGVKREIARITIEKLITDGRIHPGKIEEVVNKAKKEVEKEV
VAAGEEAILELSIPGLHPDIIKTLGRLKYRTSYGQNVLVHSIEVAKIAATLAAEIGADVE
LAKRAGLLHDIGKVLEHDVESSHAIIGGEYLKKYGEKATIINAVMAHHNEVEFETIEAIL
VQAADAVSASRPGARRETLTAYIKRLEQLEEIANSFQGVESSFAIQAGRELRMIINPDRV
NDDEATVMSREVAKKIEETMQYPGQIKVTIVRETRAVDYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgaatttaatattgggaattggcttaggtgtttttggtttagccatcgcctttgctttg
atatataaaaaaatggttattgataaacaaattcaaacattgaataaccttgaggatgaa
gtagcaaaatcaaaaattaaagcaaaagaaattttagaaagtgcagaaaaagaagcagtt
tctaaaggaaaagaaattgaattaaaagcaaaagagagagcgtattctttaaaagaagaa
gcagaaaaggaaatacgaaattcaaagaatgagattttacaaaaagaagctagattggca
aagaaagaagaaactttagaccataaaattgagaaattggaaaataaaagtcaagaatta
gaaaagacaacagaagagttagaacaaaaaagagaagaaattgaaacagtaaaaaaagaa
caagaagcagaattggaaagaatcacaggattgacaaaagcagaagcaaaggatatttta
attgcaaaattaaaagaagaactaacacatgataatgctttagccattcgtgaatttgaa
aataaattagaagatgaaaaagatagaattagtagaagaattttatcgacagcgattgga
aaagcagcagccgattatgtggcggatgcgactgtttccgtggtaaacttaccaagcgat
gaaatgaaaggaagaattatcggaagagagggacgaaatattcgttctattgaggcttta
acaggagtcgatattattattgatgatactccggaagcagtagttctttccagttttgat
ggagtaaagagagaaattgcaagaattacgattgaaaaattgattacggatggaagaatt
catccaggaaaaattgaggaagtcgtgaataaagcgaagaaagaagtagaaaaagaagta
gtagcggctggggaagaagctattttagaattatctattccaggactacatccagatatt
attaaaacattaggaagattaaaatacagaacaagttatggacaaaatgtattagtacat
tctattgaagtggcaaaaattgctgcaactttagcagccgaaataggagcagatgtagag
ctagcaaaaagagccggattactacatgacattggaaaagtattggaacacgacgtagaa
tcttctcatgctatcattggtggagaatatttaaagaaatatggagaaaaagcaaccatt
atcaatgctgtcatggctcaccataatgaagtagaatttgagacaatagaagctatcttg
gtacaagcagcagatgctgtttctgcttcaagacctggagcaagaagagaaactttgaca
gcttacattaaacgattggaacaattagaagaaattgcgaattctttccaaggagtagaa
tcttcttttgcaattcaagctggaagagaattacgaatgattatcaatcctgatagggta
aacgatgatgaagcaacagtaatgtcaagagaagtggcgaaaaaaatagaagaaacaatg
caatatccaggtcaaattaaagttacaattgtacgagaaactcgtgctgtggattatgca
aaatag

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