Fusobacterium gonidiaformans: C4N16_04145
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Entry
C4N16_04145 CDS
T05460
Name
(GenBank) PASTA domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
fgo
Fusobacterium gonidiaformans
Pathway
fgo00550
Peptidoglycan biosynthesis
fgo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4N16_04145
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fgo01011
]
C4N16_04145
Peptidoglycan biosynthesis and degradation proteins [BR:
fgo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
C4N16_04145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PRTRC_E
Motif
Other DBs
NCBI-ProteinID:
AVQ16774
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All DBs
Position
785988..787952
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AA seq
654 aa
AA seq
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MKKNRFHSRLTGIMYFVCILFMLIGLRLCQVQIAQKGKYSSSILKQVQGKDEEIGERGNI
LDRNGKQLAFNKRQYMVIIDPSKIHINEDQFLKNLQEIADKKILDLDATFFEKLEKEFEA
NKKYKVIAKKIDDVTREKIKECLSKIPEERKYLFFKKEIEREYYRKDIYETLVGMVRFTK
NSKEKKQGVFGLESRYERYLAGKTLSRDKYYSRDKKKVLPTSMEWMYTNLNGNNIYLTID
NEINYILNDEIKAQYDALNAEEAYGVIMDPKNGKILGISTYTRNPKDLRNQVFQNQYEPG
SIFKPIIVASALDEGLIQKNSTFNVGNGSIVKYRHTIRESSRSTTGILTTTEVIKKSSNV
GMVLIGDYFTEEQFEKSLRKFGLYEKTGVDFPNEIKPYTTSHEKWDKLKKSNMAFGQGIT
VTPIQMITAFSAVVNGGKLFRPYLVEKVVDDDGVVLRRNVPKVVRQVIKPEVSDMLVGML
EETVANGTGSRAKVEGYRVGGKTGTAQLSSNGRYLAHQYLASFVGFFPVENPQYVILVMI
LKPQAESVFGRYGGTASAPVVGNIIRRISKIKNVSSQEVSKIISSNKEIVDEKQDLVLGE
SMPDLKGLSPKEVMNLFQTTNYDIHIVGTGLVVRQEPAAGKSLEDVDKIEVILE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaatcgatttcacagtcgtctaacaggaatcatgtatttcgtctgtatatta
tttatgctcattggtttacgactgtgtcaagtacaaatagcacagaaagggaaatatagt
tctagtattttaaagcaagttcaaggaaaagatgaagaaattggagaaagaggaaatata
ctggacagaaacggaaagcaattggcttttaataaaagacagtatatggttattattgat
ccaagtaaaattcatatcaatgaagatcaatttttaaagaatctccaagaaattgcagat
aaaaaaattttagatttagatgctactttttttgagaaactggaaaaagaatttgaagct
aataagaaatataaagtcattgcaaaaaaaatagatgatgttaccagagaaaaaattaaa
gaatgtctttcaaaaataccggaagaacgaaagtatcttttcttcaagaaagaaatcgaa
agagaatattatcggaaagacatttatgagaccttagtcggaatggtccgatttacaaag
aattcaaaggaaaaaaagcaaggggttttcggattggaaagtcgttatgaaagatactta
gccggaaaaaccttgagtagggataaatattattctcgggataaaaagaaagtattaccg
acttctatggaatggatgtataccaatttaaacggaaataatatttatttgaccatagat
aatgaaatcaattacattttgaatgatgaaataaaagctcaatatgatgctttaaacgca
gaggaagcatatggggtcattatggatcctaagaatggaaaaattttaggaatttctact
tatactagaaatccaaaggaccttagaaatcaggtgtttcaaaatcaatatgaaccggga
tctatttttaagcccattattgttgcttctgctttagatgaaggtttgattcaaaagaat
agtacttttaatgtagggaatggaagtattgtcaaatatcgtcataccattcgagaaagt
agtagatcgacaacaggaatcttaacaacaacagaagtaatcaaaaaatcaagtaacgta
ggaatggttttaattggagattatttcacagaagaacaatttgaaaaatctttaaggaaa
tttgggttatatgaaaaaacgggagtcgattttccgaatgagattaaaccgtatacaaca
tcacatgaaaagtgggataaattaaagaaaagtaatatggcattcggacaaggaattaca
gtaactcctattcaaatgattactgccttttctgctgttgtaaatggggggaaattattt
cgaccttatctggtagaaaaagtggtggatgatgatggcgttgttttgcgaagaaatgta
ccgaaagtagttcgacaagttataaagccagaagtttcagacatgttagtaggaatgttg
gaagaaaccgtagcaaatggaacgggatcaagagcaaaagtagaaggttatcgtgtcgga
gggaaaacaggaacggcacaattaagtagtaatgggcgttacttggctcatcaatattta
gcttctttcgttggatttttcccagtggaaaatccgcagtatgttattttggtcatgatt
ttaaaaccgcaggcagagtctgtctttggaagatatggaggaacagcttctgctcctgtc
gttggaaatattattcgtcgaattagtaagattaaaaatgtatcgtcacaagaagtttca
aaaattatttcttcaaataaagaaatcgtagatgaaaaacaggacttagtattaggagaa
agtatgcctgatttaaaaggcttaagtcctaaagaagtcatgaatttatttcaaacaacg
aattatgatattcatattgtagggaccggtttggtagttcgacaagaaccggcagccgga
aagtcattagaagatgttgataaaattgaggttattttagaatga
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