Fusobacterium gonidiaformans: C4N16_04690
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Entry
C4N16_04690 CDS
T05460
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
fgo
Fusobacterium gonidiaformans
Pathway
fgo00541
Biosynthesis of various nucleotide sugars
fgo01100
Metabolic pathways
fgo01250
Biosynthesis of nucleotide sugars
Module
fgo_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C4N16_04690 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fgo01005
]
C4N16_04690 (rfaD)
Enzymes [BR:
fgo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
C4N16_04690 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
fgo01005
]
Core region
C4N16_04690 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AVQ16869
LinkDB
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Position
complement(894665..895663)
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AA seq
332 aa
AA seq
DB search
MIVVTGAAGMIGSAVVWKLNEMGINDILLVDKLRNEDKWLNIRKRDYRDWMDRDVFLDWL
FQEAEANEITAIVHMGACSATTETDGDYLMSNNYAYTKALWEYCSQRNIRFIYASSAATY
GAGEQGYHDMVSPEELKALKPLNKYGYSKKRFDDWAFKQKSHPSIWAGLKFFNVYGPQEY
HKGRMASMVFHSFRQYKETGKVKLFQSHKEGYEDGGQLRDFVYVKDVVDIIYYMLTQDFE
SGIYNIGTGQARSFLDLAMATIKAAAGREDIQVSDVIEFIPMPEDLRGKYQYFTQAQMEK
LGNTTYHLHMHSLEEGVKDYVQNYLSQEDAYL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgtaacaggtgcagccggaatgattggtagtgctgtcgtatggaaattaaat
gaaatgggtatcaacgatattcttttagtggataaattaagaaacgaagataaatggtta
aatattagaaaaagagattaccgtgattggatggatcgagatgtttttttagattggtta
tttcaagaagcagaagcaaatgaaattacagcgattgtccatatgggagcctgctcggct
acaacagaaacagatggcgactatctaatgagtaataactatgcttacacaaaggctctt
tgggaatattgttctcaaagaaatattcgttttatttatgcttcctctgctgctacttat
ggagcaggagaacaaggatatcatgatatggtaagccctgaagaattaaaagcattaaag
ccattaaataaatatggttattctaaaaagcgttttgatgactgggctttcaagcaaaag
tcacatcctagcatctgggccggtttaaaattttttaatgtatatggacctcaagaatac
cataaaggtcgtatggcatccatggtcttccatagtttccgtcaatacaaagaaactgga
aaagtaaaattatttcaatctcataaagaaggatatgaagatggaggacaactacgagat
tttgtttatgtaaaagatgtcgtagatattatttactacatgttaactcaagactttgag
tccggaatctataatatcggaaccggacaagctagaagctttctagatttggcaatggct
actataaaagctgctgccggaagagaggatattcaagtttcagatgtgattgagtttatt
cctatgccagaagatttacgaggaaaatatcaatactttacacaagctcagatggaaaaa
ttaggaaatacaacataccatttacatatgcatagcttagaagagggagtcaaagattat
gttcaaaactatctaagccaagaagatgcgtacttatag
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