Fusobacterium gonidiaformans: C4N16_04980
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Entry
C4N16_04980 CDS
T05460
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fgo
Fusobacterium gonidiaformans
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgo03400
]
C4N16_04980
DNA repair and recombination proteins [BR:
fgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4N16_04980
Archaeal homologous recombinant proteins
C4N16_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AVQ16919
LinkDB
All DBs
Position
962432..965197
Genome browser
AA seq
921 aa
AA seq
DB search
MQIKKVVLNNYRSHSHIEVAFSKGINLILGKNGRGKTSILEAIGLALFHMTDRTGKTKGK
TFMKYGEKESSIFIEFLGNDGREYSIFHHYFLKKPKVSILKDMQTEEEYRDNIEEKLEEL
CGVKAEYRDIYENVIVAKQNDFINIFKETPENRARVFNKIFNTEIYNKLFIDLKGFVEQY
LKEKEMLEVEENTLRLTLENKEERMEMLQQTEEKWKLYALKKEARLEEKQKIAKKIEQYE
FIKREFETIKSKFSFQEQKIRQNKKELQERLVLAKKAKKARFLLEEHQESYQLYMELDKK
IQEKKQEKNFLQKRREENQKLEEENRKLELLIKNNQTEEEVLQERMTEQQVLLLDLETRI
EEDQKQQKELQTSLARLQSFWKEIEISLEKQKKWEQENFNLQQKQSLQEKNHKQKTEELL
KLNIVEIQSFLQEIQEDKAEIQGKKERIAVYQQNIEDYQFAMHTLGQKICPFLKETCENM
KGHEVDSYFQGEIQKTKKLMETLQHEIKALEEKLKKEFVYRKEEASYQLLQKEVQELEKD
ILQTEILWKEILLERERQQYSFQTLLSQHNFASLEELQEKLRNLEDALLLLKIEEKEEEW
KSLQKKQEILQERVEKLQKDRMSSLERQKQNILNIQEDLEEIWLEFLKEMESLETKMLSL
QTSYRIYLENRKIADNLEEEKGKIRVLLLERDNLRISQREVNEKYRLLEKDLEQREQENW
KDKLMEVERELLAVNETLGELGEKLKNDKQVLEKIVLQEEKIAGLSKKRNKIERKYKKAE
SLRKNIKEMGTQVSKNMLHYISEGASINFHKITGRSERIYWSNEEKDKYQVYLLGENRKI
EYQLLSGGEQVSVAIAIRGTMAQYFSNSKFMILDEPTNNLDIEKRKLLAEYIGEILNHLE
QSIIVTHDDSFREMAEKIIEL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcagattaaaaaagtagtgctaaacaattatcgttctcattctcatattgaagttgct
ttttctaagggtatcaatttaattttaggaaaaaatggaagaggaaaaacttctattttg
gaagccataggtcttgctttgtttcatatgaccgatagaactggaaaaacaaagggaaaa
acttttatgaaatatggggaaaaagaatctagtattttcatagagtttttgggaaatgat
ggaagggaatattcaatttttcaccattattttttgaaaaaaccgaaagtaagtatttta
aaagatatgcaaacagaagaagaatatcgcgataatatcgaagaaaaactcgaagaacta
tgtggagtgaaagcggagtatagagatatttatgaaaatgtcattgtggcaaagcagaat
gattttatcaatatttttaaggagactcctgaaaatagagctagagtttttaataaaatt
tttaatacagaaatctataacaagttgtttatagatttaaaaggctttgtggaacaatat
ctcaaggaaaaagagatgttagaagtagaagaaaataccttgaggcttactcttgaaaat
aaagaggaacgaatggagatgctccaacaaaccgaagaaaaatggaaactttatgccttg
aaaaaggaagctagattagaagaaaaacaaaagatagcaaaaaaaatagagcaatatgaa
tttataaaaagagaattcgaaacaataaaatcaaaattttcttttcaggagcaaaaaatc
aggcagaataaaaaggaattacaagaaagacttgttctagctaaaaaagcaaaaaaggca
cgttttttattagaggaacatcaggagtcttatcaattgtatatggaattggataaaaag
atacaggagaaaaaacaagaaaagaatttcttgcaaaagagaagagaagaaaatcaaaaa
ttagaagaagaaaatagaaaacttgaattgttaataaagaataatcaaacagaagaagaa
gtgttacaagaaagaatgacagaacaacaagtacttcttctagatttagaaacgagaata
gaagaagatcaaaagcaacaaaaagaattacagacttctcttgcaagattgcaaagcttt
tggaaagaaattgagatatctttggaaaaacaaaaaaaatgggaacaagaaaattttaat
ttacaacaaaagcaatctcttcaagaaaaaaatcataagcaaaaaacagaagagttatta
aaattgaatattgttgagattcagtcttttttacaagaaattcaagaagataaggcagaa
atacaggggaaaaaagaaagaattgcagtatatcagcaaaatatagaagattatcaattc
gctatgcatactttaggtcaaaagatatgtccttttttaaaggagacctgtgaaaatatg
aaaggtcatgaggttgatagctattttcaaggagaaattcaaaaaacgaaaaaacttatg
gagactcttcagcatgaaataaaggcattggaagaaaaattaaaaaaagagttcgtctat
cgaaaagaagaagcttcttatcaattattacaaaaagaagtacaagaattagagaaagat
atcttacagacagagattctatggaaagagatactcttagaaagagagaggcaacaatat
tcttttcaaacattgttatctcagcataattttgctagtttggaagagctacaagaaaaa
ttaagaaatttggaagatgctcttttattgttaaagatagaggaaaaagaagaagaatgg
aaatctttacaaaagaaacaagaaattttgcaagaaagagttgaaaagttacagaaagat
agaatgagttctcttgaaagacaaaagcaaaatattttgaatattcaagaagatttagaa
gaaatttggttggagtttttaaaagaaatggaaagcctagaaacaaagatgctttctttg
caaacttcttatcgaatttatctagaaaatagaaaaatagcagataacttagaagaggaa
aaaggcaaaataagagttcttctgttagaaagggataatttaagaatttctcaaagggaa
gttaatgaaaagtatagactcctagaaaaagatttagagcaaagagaacaagaaaattgg
aaagataagcttatggaagtagagagggagctgttagcagtaaatgaaactttgggagag
ttaggagaaaaactaaaaaatgataagcaggtgcttgaaaaaatagttttacaagaagag
aaaatagcgggactttctaaaaagaggaataaaatagaaagaaaatacaagaaagcagaa
agtcttagaaaaaatattaaagaaatgggaacgcaagtttctaaaaatatgttacactat
attagcgaaggggccagtattaattttcataaaatcacgggaagaagtgaaagaatttat
tggagcaatgaagaaaaggataagtatcaagtctatttgctgggagaaaatagaaagata
gaatatcagttactgtccggaggagaacaggtttctgtggcaattgctattcgtgggact
atggctcaatattttagcaattctaaatttatgattttagatgagccaactaataattta
gatatagagaaaagaaaattattggctgaatatattggagagattttaaatcatttagag
caaagtattattgtaacccatgatgacagttttcgagagatggcagaaaaaatcattgaa
ttgtag
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