Fusobacterium gonidiaformans: C4N16_05875
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Entry
C4N16_05875 CDS
T05460
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fgo
Fusobacterium gonidiaformans
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fgo03016
]
C4N16_05875 (truB)
Enzymes [BR:
fgo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C4N16_05875 (truB)
Transfer RNA biogenesis [BR:
fgo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C4N16_05875 (truB)
Prokaryotic type
C4N16_05875 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Methyltranf_PUA
Motif
Other DBs
NCBI-ProteinID:
AVQ17085
LinkDB
All DBs
Position
complement(1149661..1150518)
Genome browser
AA seq
285 aa
AA seq
DB search
MDGIIIINKEKGMSSFDVIRSLRKLLQERKIGHTGTLDPLATGVLILCLGKATRLSQEIE
AQEKVYEAEMEFGYQTDTYDLEGEIVATSPKKEVKREEFEEVLSHWKGKISQIPPMYSAI
KIQGKKLYELARKGIEIKREGREVEIFGIDILDFEGKKAKIRTKVSKGTYIRSLIYDIGE
ELGSFATMTALNRIQVGEHHLKNSYTISEIHDKINVCDFSFCIPVEEYFSFPKIQLEGEK
NLILFRNGNTVIFKEKDGKYRVYQNGLFLGLGKIEKQRLKGYKYF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtggatggaattattataatcaataaagaaaaaggaatgtcttctttcgatgtcattcgt
tctttacgaaaattattacaagaacgaaaaatagggcatactggaacactagatccttta
gcaacaggagtcttaatcttgtgtcttggaaaagcaactcgtttgtcacaagagatcgaa
gctcaagagaaagtatatgaagccgaaatggaatttggttatcaaacagatacttatgat
ttggaaggagaaattgtagcgacttctcctaaaaaagaagtaaagcgtgaagaatttgaa
gaagttcttagccattggaaaggaaaaatttctcaaattcctcctatgtactccgctatt
aaaatacaaggaaaaaaattgtatgaactagcaagaaagggtattgagattaaaagagaa
ggaagagaagtagaaatttttggtattgatatcttggattttgaagggaaaaaagcgaaa
attcgaacgaaagtttccaaaggaacctatattcgttctttgatttatgatattggagaa
gagttaggaagttttgctaccatgacagcactcaatcgaatacaagtaggagaacatcat
ttgaaaaattcctatacaatttcagaaattcatgataaaataaatgtctgtgattttagt
ttttgtattcccgtagaagagtatttctcttttcctaaaatacaattagaaggagagaaa
aatctaattcttttccgtaatggaaatactgtaatttttaaagaaaaagatgggaaatat
cgagtgtatcaaaatggactatttttaggactaggaaaaatagaaaagcaaagactaaaa
ggatataagtatttttaa
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