Fusobacterium gonidiaformans: C4N16_07270
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Entry
C4N16_07270 CDS
T05460
Name
(GenBank) diguanylate phosphodiesterase
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fgo
Fusobacterium gonidiaformans
Pathway
fgo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4N16_07270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fgo02000
]
C4N16_07270
Transporters [BR:
fgo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C4N16_07270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AVQ17339
LinkDB
All DBs
Position
complement(1452392..1453906)
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AA seq
504 aa
AA seq
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MKKVFTLLLGLLAVLFVACGEKQSNTEGQEKVVVVSQGAKPKSLDPYMYNEIPGLAVTRQ
FYDSLFKKEDDGSITPLLAESYEYKTPTELWITLRQGVKFHNGDILTVDDVLFSFQRMKE
TPASAIMISDIEKVEAVDDKTFKIILKQSSAPLLFSLSHPLTSILNKKYVEEHQGNISTE
PMGTGPYKFVSWGDGEKIEMAAFDDYFRGRAKVDKVIFREIIEDSSRLAALETGEIDIAY
DMTAIDSGTIEAKDNLVLISEPTTAVEYICLNNQKSPFDNKLFRKALDYAIDRQSIVDSV
YMGRAKITNSIVNPNVFGFYDGLNKFTFDPEKAKELIAESGIKNPKFTLSINEGSDRQQA
AQIIQANLRDVGIDMQIQILEWGTYLQSTAEGKFEAFLGGWMSGTSDADIVLFPLLDTKS
FGSAGNRARYSNPAFDKLVEDARSELDVEKRKELYKEAQLILQEDTPMTIMYAKNKNIGV
NKRIKGFIYDPTNVHSLYTLEIAE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtatttacattattacttggattgttagctgttctttttgttgcttgtggg
gaaaagcaatcaaatacagaaggacaggaaaaagtagtcgttgtgtcacaaggggcaaaa
cctaagagtttggatccttatatgtataacgaaattcccggacttgccgttacaagacaa
ttttatgatagcctatttaaaaaagaagacgatggaagtattactccattgcttgcagaa
agttatgaatataagacaccgacagaactttggattactttaagacaaggggtaaaattc
cataatggagatattttaaccgtagatgatgttttgtttagttttcaacgtatgaaagaa
acaccggcttctgccattatgatttctgatattgagaaagtagaagcagtggatgataaa
acctttaaaattattttaaaacaaagttcggctccactattgtttagcttatctcatccg
ttgacttctattttaaataaaaaatatgtagaagaacaccaaggaaatatttcaacagaa
cctatgggaacaggaccttataaatttgtttcttggggagatggagaaaaaattgaaatg
gcagcctttgatgattatttccgaggaagagcaaaagtggataaggttatcttccgagaa
attattgaagatagtagtcgtttggcagcattggaaaccggagaaattgacattgcttat
gatatgacagcgattgattccggaacgattgaagcgaaagataacttggttttaatttca
gaaccgacaactgcagtggaatatatttgtttaaataaccaaaaatcaccatttgataat
aaactattccgtaaggctttggactatgccattgacagacaaagtattgtagattccgtg
tatatgggaagagcgaaaattacaaattcgattgtaaacccaaatgtattcggtttctat
gacggtttaaacaaatttacttttgatccggaaaaagcaaaggaattgattgcagaatcc
ggaattaaaaatccgaaatttactttatctatcaatgaaggatctgacagacaacaagca
gctcaaatcattcaagcaaacttacgagatgttggaattgatatgcaaattcaaatttta
gaatggggaacttatttacaaagtactgcggaaggaaaatttgaagctttcttaggtgga
tggatgtcaggaacttccgatgcagatatcgtattgttcccattattagatacaaaatct
tttggaagtgccggaaacagagctagatactcaaatcctgcctttgataaattagtagaa
gatgctagaagcgaattagatgtagaaaagagaaaagagctatacaaagaagcacaattg
attcttcaagaagatacccctatgacaattatgtatgcaaagaataaaaatataggagta
aataaaagaataaaaggattcatttatgatccgacgaatgtacatagcttatacactttg
gaaattgcagaataa
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