Fusobacterium gonidiaformans: C4N16_07800
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Entry
C4N16_07800 CDS
T05460
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fgo
Fusobacterium gonidiaformans
Pathway
fgo03030
DNA replication
fgo03430
Mismatch repair
fgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4N16_07800
03430 Mismatch repair
C4N16_07800
03440 Homologous recombination
C4N16_07800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgo03032
]
C4N16_07800
03400 DNA repair and recombination proteins [BR:
fgo03400
]
C4N16_07800
Enzymes [BR:
fgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4N16_07800
DNA replication proteins [BR:
fgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4N16_07800
DNA repair and recombination proteins [BR:
fgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4N16_07800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
tRNA_anti_2
Phage_tail_terminator_3
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AVQ17438
LinkDB
All DBs
Position
complement(1563009..1566443)
Genome browser
AA seq
1144 aa
AA seq
DB search
MGDFVHLHLHTEYSLLDGVGKIEDYMKRAKSLRMKAIAITDHGNMFGALEFYQKAQKYGL
KPIIGVEIYLSEYPLAEKKGRNFHLILLAENYEGYQNLMKLSSLAYLEGFYYKPRLDKEL
LKKYSKGIIALSACMNGEIASYILEGAEESKIEATILEYQDIFGKENFYLEVQAHEEIEQ
QQVNEALYAFGKKMKIPLVATNDTHYVNKGEHILQDVIICIQTGSHLSDEKRMRIEMQDL
YLKSYEEMYAVLGEQYQEALQNSVEIAKRCQLWIPMHEFQFPDYNLPEGISSLEEYLKKL
TYEGLGKRYPQGLDERIVERVEYELSIINKMGYAGYFVVVWDFISFARSRKIPIGPGRGS
AAGSLVAYALEITQLDPLEYRLIFERFLNPERISMPDIDIDICQERRQEIIDYVVQKYGQ
DKVAQIATFGTLKARAAIRDVGRVMDVELSKIDKAAKCIPMFASLREVLEENIELKTMYQ
QDVELKNVINTAMRIENKVRHISTHAAGVLITKKSLTESVPLYADSKNGIVSTQYQMKEL
EELGLLKIDFLGLRTLTILQRTQDYIEENTGKKIELSEIPLQDKTVYEMLSKGDSFGVFQ
MESRGLRSILKRLQPNSFGDIVALLSLYRPGPLGSGMVDDFIDRKHGKKAIEYPHPSLEE
VLKETYGVILYQEQVMKIANIMADYSLGEADLLRRAMGKKNVEIMHENRSKFIERSIKKG
YSREKAEEIFDLIDKFAGYGFNKSHSAAYALIAYWTAYCKVHYPKYFYAALLSSEISDID
KISFYFADAKAHGVEIETPDVQFPSSRFVVKGDKILFALSAIKNVGTGISEKIKEEREKK
GEFRSYEDFVERMKKEGLNKKGLEAFIYAGALDSLSGNRHEKIESLDKVLDYVQRKAKAD
DIQQMNLFGDSKKNLVQFSLSRIEEYPMEVLLEKEKEFLGFYVSANPLDRYESLYQSFDF
DEFNIIKEENMEREVWLYGIIQNLKKTRTKKGDAMAFADLENYQGQIPMVIFPKVYQENG
FLLVDKSIVFVKGKVQIDYFRGEEIKKVIVQKLFSFEHFLSQSSLRVYLHIVEQEMDVYP
KLKESLLQYRGGETELYFALQGKEGKKLRKSSFSIHLTLSFLEEVSRIIGKNRIKIKWKE
SEHR
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgggagacttcgttcatttacatttacatacagaatatagtttgttagatggtgttgga
aaaatcgaagattatatgaaacgagcaaagtctttgcgaatgaaagcgattgccatcaca
gatcatggaaatatgtttggagctttggagttttaccaaaaggcacaaaaatatggattg
aaaccaatcattggagtggagatttatctcagtgaatatcctttagcagaaaaaaaagga
agaaatttccatttgattttgttagcagaaaattatgagggctatcaaaacttaatgaaa
ctttcctccttggcgtatttagaaggtttttattataagccacgactggataaggagctt
ctaaaaaaatattcgaaaggaatcattgctctatctgcttgtatgaatggagaaattgct
tcctatattttggaaggagcagaagaaagtaaaatagaggctactattttagagtatcaa
gacatctttggaaaagaaaatttttatttagaagtacaggcacatgaagaaatagaacaa
caacaggtcaatgaggccttgtatgcttttggaaagaaaatgaagattcctttagttgca
accaatgatactcattatgtgaataaaggcgagcatatattacaagatgtcattatttgt
attcaaaccggatctcatctttccgatgaaaaaagaatgcgtatcgaaatgcaagatttg
tatttgaaaagttacgaggagatgtatgcagttctaggagaacaatatcaagaagctctt
caaaactcggtagaaattgcaaaacgttgtcaactttggattcctatgcacgaatttcaa
tttccggactataatttaccagaaggaatttccagtttggaagaatatttaaagaaatta
acttatgaaggattggggaaacgatatccccaaggtttagatgaaagaattgttgaaaga
gtggagtatgagttatccattatcaataaaatgggctatgcaggatattttgtcgttgtt
tgggactttatttcttttgcgagaagtcgaaaaattccaattggaccggggagaggttct
gctgcaggaagtttggttgcctatgctttggagattacacaattagatcctttggaatat
cgtttgatttttgagcgttttttaaatccggaaagaatttcaatgcccgatattgatatt
gatatttgtcaagaaagaagacaggaaattattgattatgtagttcaaaagtatggacaa
gataaggtagcacaaattgctacttttggaactttaaaagcaagagctgccattcgagat
gttggaagagtcatggacgtagaactttccaaaattgataaggcggcaaaatgtattccc
atgtttgcttcattacgagaagtcttggaagaaaatatcgaattaaaaacgatgtaccag
caagatgtcgaattaaaaaatgtcatcaatacagcgatgagaattgaaaataaagtgaga
catatttcaacacatgctgccggagtcttaattactaaaaaatctttgacagaaagtgtt
cctttgtatgcggattctaaaaatggaattgtatcgactcaatatcaaatgaaagagcta
gaggaattgggattattaaaaattgactttttaggactaagaactctaaccattttacaa
agaacacaggactatattgaggagaataccggaaaaaaaatagaattatcggagattcct
ctacaagataaaacggtgtatgagatgctttccaaaggagatagttttggagtctttcaa
atggaatcaagaggacttcgcagtattttaaaacgtttacaaccgaattcttttggagat
attgtagcccttctttctttgtaccgtccgggtcctttgggttccggtatggtggatgat
tttattgatagaaagcatggaaaaaaagctattgaatatccacatccaagtttagaagaa
gtattaaaggaaacctatggagtcattctctatcaagagcaggttatgaaaattgcgaat
atcatggcagattatagtttaggagaagcggatttattacgtcgagccatgggaaagaaa
aatgtagaaatcatgcatgagaatcgttctaaattcattgaaagatctatcaaaaaaggc
tattctcgagaaaaagcagaggaaatttttgatttgattgataaatttgcaggctatgga
tttaataagtctcactcggctgcctatgctctcattgcttattggacagcatattgtaaa
gtacactatccgaaatatttttatgccgctttgcttagctcggaaatttcagacattgat
aaaatttctttttattttgcagatgcgaaagcacatggggtggaaattgaaactcctgat
gtacaatttccttcctctcgttttgtcgtaaaaggagataaaattctatttgctctttct
gctattaaaaatgttggtacaggaatttcagaaaagattaaggaagagagagaaaaaaaa
ggagaatttcgctcctatgaagattttgtcgagagaatgaaaaaagagggattgaataaa
aaaggattggaagcctttatttatgcaggtgctttagattctttatcaggaaatcgacat
gaaaaaatcgagagtttggataaagtattggattatgtacaaagaaaggcaaaagcagat
gatattcaacagatgaatttatttggcgactctaagaagaatttagtacagttttctctt
tctcgtatagaagaatatcctatggaagttcttctagaaaaagaaaaagaatttttaggt
ttttatgtgagtgcgaatcctctggatcgatatgaaagtctataccaaagttttgatttt
gatgaattcaatattatcaaggaagaaaatatggagagggaagtttggctctatggtatt
attcaaaacttaaagaaaacgagaacaaaaaagggagatgccatggcctttgcagactta
gaaaattatcaaggtcaaattcctatggtcatttttccaaaagtataccaagaaaatggc
tttcttctagttgataaaagtattgtgtttgtaaagggaaaagtgcaaatagattatttt
cgaggagaagaaatcaagaaagtaattgtacaaaaattattttcttttgaacatttttta
tctcaaagcagtctaagagtatatctacatatcgtggagcaagaaatggatgtctatcct
aagttaaaggaaagcttattgcagtatcgaggcggagagacagaactttatttcgctctt
caaggaaaagagggaaaaaagttaagaaaaagttctttttccattcatttaacactttct
tttttagaggaagtgagtcgaattataggaaaaaatagaataaaaataaaatggaaagaa
tcagagcacagatga
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