Fusarium graminearum: FGSG_00270
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Entry
FGSG_00270 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
fgr
Fusarium graminearum
Pathway
fgr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FGSG_00270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fgr03009
]
FGSG_00270
Ribosome biogenesis [BR:
fgr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FGSG_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
PQQ_2
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
23547763
NCBI-ProteinID:
XP_011315912
UniProt:
I1R9V7
LinkDB
All DBs
Position
1:838527..841188
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AA seq
869 aa
AA seq
DB search
MDIHRCRFVPYKPSAINAIAFSHPKTRSAQQGNLARLAIGRANGDIEIWNPQNGSWNQEL
IMPGGKDRSVDGLVWVNEPDQDLGGGRVVVGKSRLFSIGYTSTVTEWDLETGRPKRHASG
QHGDIWCMAAQPSGTDKVGLGVESQDSTKLVAGTIDGELVMYSIEDDDLRFQRVLLRSPT
KKAQMVSITFQSRRVAIVGCSDSTIRAYDVTKGHMLRRMTLGADLGGGAKDIIVWSVKCL
PNGNIVSGDSTGQVCLWDGKTYTQAQRIQSHKQDVLSLAISADGTSILSGGMDRRTILYK
QNSGAGARWSKVWGRRYHDHDVKCMASFESGKISVVVSGGPDANPVVIPMKEMGRENHRI
MSSLPQQAPLLSAPKARFVVSWWDREVHIWLLRKSATEMIKTENIDINQNRKLIKTIVVK
GDSNITSATIDDEGSLLIVATAIDVKAFRLEHQDPVKPSDVKISSSELPSKLAGVGATKV
QLSPNAQWLCAIQEGSRVVMGALDPVTPRPSLVFSPNVQRLTRLRRQIPRHILNGGLGSY
DRTITQVAFSPDSKMLVTSDIAGYIDTWILSDGEKIKSEDDASSSGESDSSDEEEEISQN
IERWIRNPGAKLLPKLHSAATVLSFSADVPRAKVSPRSSIDGIDGAADHVDDYTLLTITS
SWSLRTFHPLQGSLTPWSRRNVRNDMPAPVQDLLDLAKGVFWEGSRAWIYGVSFLLMLDL
AQDLPKSAESDNDKQTLKRKRTGPSTGAGGKMEQGAIAPSLVRKHTAGQWEDVDMEDAPQ
PEDDISDDEADQADGELAQLRNREVGKDVELAETGGERKSWWMTYKYRPIFGVVPISTAD
QPLEVALVERPTWDVDMPESYFAVEQWRK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatatccatcgttgtcgattcgttccctacaagccctccgccatcaacgccatcgcc
ttctctcaccccaagacacgctcggcgcaacaaggcaacctcgcgcgacttgcgatcgga
cgagctaatggcgatatcgaaatctggaaccctcagaatggctcctggaatcaggaactc
atcatgccaggcggcaaagatcgaagcgtcgatgggttggtctgggtcaacgagcccgat
caagacctcggcggtggacgcgtcgtcgttggaaagtcacgactcttcagcataggttat
acttctacagttacggaatgggatctcgagacaggacgacccaagaggcacgccagcggc
cagcacggagacatctggtgcatggctgctcagcctagtggaaccgacaaggttggactc
ggtgtcgaatctcaagactctaccaagcttgttgccggaacaatcgatggtgagcttgtc
atgtactctattgaggatgatgacctgcgattccagcgagttttgttgcgatcgccaaca
aagaaggctcagatggtcagcatcaccttccagtcgcgcagagtcgccattgtcggctgc
tccgatagcacaattcgagcgtacgatgttacaaagggccacatgttgcgcaggatgaca
ctgggcgcggacctaggcggcggtgctaaggacatcatcgtctggtctgtcaagtgtcta
cccaatggcaacatcgtctcaggcgattctactggccaagtttgcctctgggatggcaag
acatacacccaagcacaacgaattcaaagccacaagcaggatgttctcagtctcgcaata
agcgccgacgggacttccatcctgagcggtggcatggatcgacgaacgattctttacaag
cagaacagcggcgctggagcccgatggagcaaggtttggggacgaagataccacgaccac
gatgttaagtgcatggcatccttcgagagtggcaaaatcagcgtcgttgtttcaggaggt
cctgatgccaaccccgttgtcatccccatgaaggaaatgggtcgcgagaatcaccgtatt
atgtctagtctgccacagcaggctcctttgttgagcgcgccaaaggcccgcttcgttgtc
agctggtgggatagggaggttcacatctggcttcttcgaaagtcagccaccgaaatgatc
aagaccgaaaacatcgatatcaaccaaaaccgcaagctgattaagactattgtcgttaag
ggcgactcgaatattacatcggcaactatcgacgatgagggttcgcttctgattgttgct
actgctatcgacgtcaaggccttcagactagagcaccaggatcccgtcaagccctctgat
gtcaagatttcctcttccgaacttccttcaaagcttgccggagtaggtgccaccaaggtg
cagctgtcgcctaacgcgcaatggctctgcgcaatccaagaaggctctcgcgttgtcatg
ggtgccctcgaccccgttactcctagaccttcacttgtcttttcaccaaatgtccaacga
cttacacgcctacgacgacaaatcccacgtcacatcctcaacggaggattgggtagttac
gataggaccattacacaggtcgctttctcgcctgactccaagatgctcgtgacgtctgac
atcgccggctatatcgacacctggatcttgagtgacggcgaaaagatcaagtcagaggat
gacgcgtcctcatcgggcgagagtgactcttcggatgaggaagaagagatttcgcagaac
attgagaggtggatccgtaaccccggtgctaagttactgcccaagctacactctgccgct
acggttctgtcattctcggccgatgttcctcgagccaaggtctcccctagaagctctatt
gacggaattgatggcgcagctgaccatgttgatgactacaccctcctcaccatcacctca
tcgtggagcctacgtaccttccaccctctgcaaggctctctgaccccttggtcacgtcgc
aatgtccgaaacgatatgcctgctcctgtgcaggatcttctcgatctcgcaaagggagtt
ttctgggagggctcccgcgcttggatctatggtgtatcattcctccttatgcttgaccta
gctcaagatctccctaaatctgccgagagcgacaacgacaagcaaacgctcaagcgcaag
agaacaggcccctctaccggagctggtggtaagatggagcaaggtgctattgcaccctct
ctggtccgcaagcacacagccggtcagtgggaggacgttgatatggaagacgctccccaa
cccgaggatgacatcagtgatgatgaggctgaccaggccgatggtgaacttgctcagcta
cggaaccgtgaagtgggcaaagacgtcgaactcgccgagactggcggtgaacgcaagagc
tggtggatgacctacaagtacagacccatctttggtgttgttcctatcagcaccgcagac
cagcctctcgaggttgccctggtggagaggccgacatgggatgtggacatgcccgagagc
tactttgccgtcgagcagtggaggaagtaa
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