Fusarium graminearum: FGSG_00358
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Entry
FGSG_00358 CDS
T01038
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_00358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fgr03041
]
FGSG_00358
03032 DNA replication proteins [BR:
fgr03032
]
FGSG_00358
Spliceosome [BR:
fgr03041
]
Complex A
U1 snRNP components
Sm proteins
FGSG_00358
U2 snRNP components
FGSG_00358
Complex B
U1 snRNP components
FGSG_00358
U4/U6.U5 tri-snRNP components
FGSG_00358
Complex C
U2 snRNP components
FGSG_00358
DNA replication proteins [BR:
fgr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
FGSG_00358
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
GTP_EFTU_D3
SelK_SelG
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
23547848
NCBI-ProteinID:
XP_011316016
UniProt:
I1RA36
LinkDB
All DBs
Position
1:complement(1154016..>1154723)
Genome browser
AA seq
126 aa
AA seq
DB search
MKLVRFLMKCANETVTIELKNGTIIHGTISSVSPQMNTALRNVKMTIKGQEPISLETMNI
RGSTIRYFILPDSLPLDTLLIDDAPKPKNKARKEAADRGARGGRGRGGPRGRGRGGGGGR
GRGGRP
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcagattcctcatgaaatgcgccaacgagacggtgacaattgagttgaaa
aatggaaccatcatccacggcacaatctcctccgtctccccccagatgaacacggctctt
cgcaacgtcaagatgaccatcaagggtcaggagcccatctccctcgagaccatgaacatc
cgaggttctacaatccgatactttatccttcccgactcactacctctcgacacactactc
attgacgacgcgcccaagcccaagaacaaggcccgcaaggaggcggcagaccgtggtgcc
cgaggtggacgaggcagaggcggtcccaggggacgtggacgcggcggcggtggtggtcgc
ggccgcggaggacgaccttag
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