Fusarium graminearum: FGSG_00458
Help
Entry
FGSG_00458 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_00458
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_00458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_00458
03041 Spliceosome [BR:
fgr03041
]
FGSG_00458
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FGSG_00458
mRNA degradation factors
5'-3' decay
Lsm complex
FGSG_00458
Spliceosome [BR:
fgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FGSG_00458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
RnlA-toxin_DBD
Motif
Other DBs
NCBI-GeneID:
23547947
NCBI-ProteinID:
XP_011316127
UniProt:
I1RAD1
LinkDB
All DBs
Position
1:complement(1456340..1456731)
Genome browser
AA seq
82 aa
AA seq
DB search
MENGAISQGEGKDPSSFLGNIIGNPVTVKLNSGVVYKGELQSVDGYMNIALEKTAEYVNG
QKRREYGDAFVRGNNVMYISAD
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggtgccatttctcaaggagagggcaaggacccttcaagcttcctcgggaac
atcatcggcaatcctgtcactgtcaaactcaactctggcgtcgtctacaagggcgagctt
cagtcggtggatggctacatgaacattgctttagaaaagacagcagagtatgtcaacggt
cagaagcgcagggaatacggtgacgcctttgtgagaggaaacaacgtcatgtatatttca
gcagactaa
DBGET
integrated database retrieval system