Fusarium graminearum: FGSG_00877
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Entry
FGSG_00877 CDS
T01038
Name
(RefSeq) ATP-dependent RNA helicase ROK1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
fgr
Fusarium graminearum
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fgr03009
]
FGSG_00877
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGSG_00877
Ribosome biogenesis [BR:
fgr03009
]
Eukaryotic type
90S particles
Helicases
FGSG_00877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF4736
Motif
Other DBs
NCBI-GeneID:
23548345
NCBI-ProteinID:
XP_011316604
UniProt:
Q4IPI1
A0A1I9EX09
LinkDB
All DBs
Position
1:complement(2862062..2864143)
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AA seq
693 aa
AA seq
DB search
MDILKLLSRGTKKTQKGSQNAFNPQQKLPSAGTSTNPQLYHDQVRGHKRKRTKNESEPEA
KVDLPEVDFFAPKPEPVAEAPVEVDEPVQAPKPTRSSRLLSEDECRQLLRSHRLKITLLS
KTEDQSKVKKSKKKKKAAVEVKKDSKKQLFPQPLDSFGELRNAYGLSDKVADNLVFQGYR
VPTEVQMGSLPLLVHPQAALKDEDGLDGGVDFLAIAPTGSGKTISFLIPAINNILRRRSE
ENTGNIHELEAVIVAPTRELVHQIVSEGQKLCKGTGLKVVSMKKHTHLSADQVDMAEDSS
EDEEDKESESEDDDKKPSDDKPKQITTPDILVTTPFLLFKFLTSGPPSTQKVLPTVRDLI
LDEADVLLDPLFRDATMADWTACTNTNLRVSFWSATMGSNIESMVTEKLTSRAQSLDITP
KPFVRLVVGLKDTAVPNIAHKLIYTASEQGKLLALRQLLHPTASDDSGPPLRPPFLVFTQ
TIDRATALHEELQYDIPLEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWILITTDVLA
RGVDFAGVNGVVNYDVPGSSAGYVHRAGRTGRAGREGGIAVTFYTKEDIPFVKMVANVIA
VSEKQAGKTGDEAGVQKWLLDALPNVRKADRKKLKERGNEARRSGVKSKISSKSGYERRR
ENNRLGAIEGSKKRKLQANDDSGDDGEWGGIDD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctcaagctcctatcgcgcggaaccaaaaagacccaaaagggttctcaaaat
gcattcaaccctcagcagaagcttccctctgccggcaccagcacgaaccctcagctatac
cacgaccaagtccgaggccataagcgaaagcgaacaaagaatgaatccgaacccgaggct
aaagtagacttgcccgaagtcgacttctttgcacccaagcctgagcccgtcgccgaagca
cccgtcgaggtggacgaacctgtccaggcgccgaagcctacgcgatcatctcgactattg
agcgaggacgagtgtcggcagcttctgcgatcgcatcgactcaagattactctactttca
aagactgaagatcagtccaaggttaagaagagtaagaagaagaaaaaggctgccgtcgaa
gttaagaaggatagcaagaagcagctcttcccgcaacctttggactctttcggcgagctt
cgaaatgcctacggtctctcagacaaggtcgccgataacctcgtgttccagggataccga
gttcccactgaagttcaaatgggcagtctgcctctcctggttcacccccaagccgcattg
aaggacgaggatggattggacggaggtgtcgactttctcgctattgcgcctacaggaagt
ggaaagacaattagtttcttgatccctgctatcaacaacatcttacgcaggcgctctgaa
gaaaacaccggcaacatccatgagctcgaagccgttattgttgcgccaacccgagaactg
gtgcaccagatcgttagtgaaggacaaaagttgtgcaagggtacagggctcaaagttgtg
tccatgaagaagcacacccatctatcagctgatcaggtggatatggcagaggacagctct
gaagacgaagaggataaggagtcagaatcagaagatgatgacaagaaaccctctgatgac
aagcccaaacaaatcaccacgcctgatatcttggtcaccacacccttccttctattcaaa
tttctcacctctggaccccctagcacacaaaaagtcctgcctactgtacgagatctgatt
ctagacgaggcagatgttttgcttgatcctcttttccgagacgctacaatggccgactgg
acagcatgcacaaacaccaaccttcgggtttcgttctggtctgctaccatgggatccaac
atcgagtctatggttacagagaagttgacctcaagagcacagtctttggacattacaccg
aagccctttgttcgattggttgtcggtctcaaggatacagccgtgccaaacatcgctcac
aagctcatctacactgcatccgagcaaggaaaactgcttgctctgcgtcaactgctacac
cctacagccagtgatgattcgggtcctccactacgaccccctttcctagtctttacacaa
actattgacagagcaactgctttacacgaagagttgcagtacgatatccccctcgaggct
ggtggtgctgcaagaattgccgccttgcacagtgggcttactgactctgctcgctcttcc
atcatgcgcaagttccgtgctggtgacatttggattttaatcacaaccgacgtgctagcg
cgaggcgtggactttgccggcgtcaacggcgtcgtcaactacgacgttccgggctccagt
gctggctatgtccatcgcgctggacgaacaggtcgtgctggtcgcgaaggtggtatcgca
gtcaccttctacaccaaggaagacattccgtttgtcaagatggttgccaatgtgatcgct
gtcagcgagaagcaggccggaaagacgggagacgaggctggagtgcaaaagtggctgctc
gatgctttgccaaatgttcgcaaggcagaccgcaagaagctcaaggagagaggtaacgag
gcgcgacgaagcggcgtcaagtccaagatctcatccaagagtggttacgaaagacgcagg
gagaataaccgtcttggcgctatcgagggaagcaagaagagaaaactacaagccaacgac
gacagcggcgatgatggagaatggggtggcatcgacgattaa
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