KEGG   Fusarium graminearum: FGSG_01292
Entry
FGSG_01292        CDS       T01038                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
fgr  Fusarium graminearum
Pathway
fgr03013  Nucleocytoplasmic transport
fgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FGSG_01292
  09122 Translation
   03013 Nucleocytoplasmic transport
    FGSG_01292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fgr03019]
    FGSG_01292
   03041 Spliceosome [BR:fgr03041]
    FGSG_01292
Messenger RNA biogenesis [BR:fgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     FGSG_01292
Spliceosome [BR:fgr03041]
 Complex C
  Other components
   EJC/TREX
    FGSG_01292
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FGSG_01292
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd DSE1_N Beta-prop_WDR19_1st Beta-prop_IFT140_1st CFAP251_N Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_WDR41 Ras PAC11
Other DBs
NCBI-GeneID: 23548737
NCBI-ProteinID: XP_011317074
UniProt: I1RCH7
LinkDB
Position
1:<4258610..>4259851
AA seq 336 aa
MAPVLRARQSLSKDKFSSYFGNLRSQPYNDANNSRGSNPHSLRCIAWNPLGTLVATGSSE
KTLRVWNPEKPHVKFSTELKGHSSSIEKVAFNPTKDAELCSVSSDGVVKFWDVRTKACFN
EVKGLGDAFTLVWAPDGNSLLVGNKADTIYVLSPTQSTPISTHQQSVQTNQIAFCWSGEK
IFVTTAEGRIRVLSYPGFEPVLQSNHGDETSEYELNGHTSSCLTADLQPTGRYLATGGSD
SVIALWDTTDWVCQRTITRMVGPVKSLSFTFDGSFVVGGSDEGSGLEISHVETGEHVHTF
KTAGACPVVAWAPTRYCLAYSDLGILRIVGVDVDRK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcgccagttctccgagcaaggcagagtctgtccaaggacaagttctccagctacttc
gggaacctgaggagtcaaccctacaacgatgccaataattcgcggggttcaaatcctcac
agcctacgctgcattgcgtggaatcccctcggaaccctggtagcaacaggctcatcagag
aagactctacgagtgtggaaccccgagaaacctcatgtgaagttctcgacggagctcaag
ggtcactcatcatctattgaaaaggtagctttcaatccaacgaaggatgcagagctctgc
agtgtgagcagtgacggcgtggtcaaattttgggatgtgcggacgaaagcctgtttcaac
gaagtcaaaggacttggagacgccttcactcttgtgtgggcgccagacggtaactcgctt
ctcgtcgggaacaaggcagacaccatctacgttctatcaccgactcaatccacgcccatc
agcactcatcaacagtcagtgcagaccaaccagatcgcattctgttggagcggcgagaag
atattcgtgaccacggcagaaggccgcattcgggttctgtcgtatccgggttttgagcct
gtgcttcagagcaatcacggtgatgaaactagcgagtatgagcttaacgggcatacctcg
tcgtgcctaaccgcggatctacagcctactggacgatatctggcgacgggtggctcagac
tcggtcattgcattgtgggataccacggactgggtatgccagaggacgattaccaggatg
gttggccctgtcaagagtctcagcttcacatttgacggtagttttgttgtgggtggcagt
gatgaaggatctgggctggagatatcacatgttgaaacaggagagcatgtacacacgttc
aagacggctggtgcttgtcctgtagtcgcttgggctccaacgcggtattgccttgcgtac
agcgatcttgggatcttgaggattgtgggtgttgatgttgacagaaaataa

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