Fusarium graminearum: FGSG_01948
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Entry
FGSG_01948 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
fgr
Fusarium graminearum
Pathway
fgr03013
Nucleocytoplasmic transport
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FGSG_01948
03015 mRNA surveillance pathway
FGSG_01948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_01948
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
FGSG_01948
mRNA cycle factors
P-body specific factors
FGSG_01948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
PF3D7_1223600_M
CBP4
RseA_C
Motif
Other DBs
NCBI-GeneID:
23549357
NCBI-ProteinID:
XP_011317803
UniProt:
I1RE71
LinkDB
All DBs
Position
1:<6416984..>6420724
Genome browser
AA seq
1142 aa
AA seq
DB search
MDRARKRELRTLNEKAWDGESGMNHLIYPYPTTSPRPRQLTQTITDVFPVGKTLDSSLKK
NTAFIKRLRTAVTAATLSTFLQEIRTLSLHKYLSEIISACYEGLCRLKSPGEIEAGVEIV
SALHQRFGPSEFTEYLAWLLGKGMATPDKGILKSLAPEVREKEEKERIIRQRALLRVVTE
LWLVGVIRTLDDVSKPDDATKGAAGKTTELKTRTSKASGAEPFPLEVLKDLLGHDREHAN
LPLLVIFVKSFSWDILGVKPTGADGRKTVEEDGSTEGHEAEQGDDGENGTSSDEDQPFAE
PEMRDRFRNILKKYFDDVKGHIIRDQKSIQSQARRNAEAYVKSGEVFEDRQANYEKQVKA
QERLVSNAQVVADAIGVEMPDLKDSDDSLAASNGSIGLVKTGDYLRSMGDGAGIWEDDDE
RRFYENLVDLKGKVPAILLEDGKKKKTDTDEQVGKKLDPAEVPETTKIAETADDQSTSIA
NRTIGAQVDALLARLPELTNKDIVDQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPS
WSRLVATLGRYMPDVPKGLVDYLDAEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVP
EHVVFHCLKVSLDDFSRMNIEILCNLIENCGRYLLRNPETAPRMMSFLETLQRKKSVQHI
GQPERMLIDNAVYYVDPPERSAIEQKERTPMELFVRKLIYVDMTKRNYSKILKQIRRLHW
EEAEVVAILEKVFSKPGKVKYGSVHLLGILLSALYRYHPAFVVKVIDNVIESMTFGLEQN
DYRFYQRRIAEVKYLGELYNYRMLEHPVIFDTMYKIMTFGYGGPPVPGKYSPLDPPDDFF
RIRLVSTMLETCGMFFNRGAAGKKLDYFLSFFQYYIFTKASLPMDIEFLVHDTFALTRPQ
WKIASGLEEAVKAFQLAVAQDQKSAGVDKGVDVDDATSDALSDDDNDEDGDDNDDSASEE
EEVEDMDEDSDSDSAFDEEAIVVTRQEEEVDPEDEADFEREYAKMMAESLESRKFERKQL
FDVPLPVRSKTREATSTEGGEGESPPGHTMAFSLLTKRGNRQQTRTVELPSNSTFAVAMK
NQQQAEREEQQRIKNLVLNYDLQQNEDPDGGTDPQLPQLYRNINIHNRNQATNDQRRIIT
TV
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgcaaggaagcgcgaattgcgcacgctgaatgaaaaggcatgggatggcgaa
tctggtatgaatcatctcatctatccctaccccaccacctccccccgccctcgccagtta
acacaaactatcacagatgtattccctgtcggaaagactctcgattcgtccctcaagaag
aataccgctttcatcaaacgattacgaactgctgtcactgctgcaaccctcagcaccttt
ctccaggaaatccgaactctgagcctgcacaagtacctttccgaaatcatatccgcctgc
tatgaaggcctttgtagactcaagtcacccggcgaaatcgaggccggtgtcgagatcgtc
agtgcgcttcatcagcgattcggacccagcgagtttacggaatatctagcatggctgctt
ggtaagggtatggcaactcctgataagggtatccttaagtctctggcacccgaggttcgc
gagaaagaggagaaagagcgtatcatcagacaacgcgcattgcttcgggtggtaacagaa
ctgtggcttgttggggttatcaggacacttgacgatgtcagcaagcctgacgacgcgacc
aagggagctgccggcaaaacaactgaactgaagactcggaccagcaaggcttcaggtgcg
gaacctttccctctcgaagtactaaaggatctactcggacacgaccgcgaacacgcaaac
ctcccgcttctcgtcatctttgtcaagtcattcagctgggatattcttggcgtaaagcca
acaggagccgacggccgcaagacagtggaggaagatggctcaacagaaggacacgaagct
gagcagggcgatgacggcgagaatgggacatcctccgacgaagaccagccctttgcggaa
cccgaaatgcgagatcgatttaggaatatcctgaaaaagtactttgacgacgttaagggg
catatcattcgggaccagaagtcgatacaatcgcaagcccggcgaaatgctgaagcctat
gtgaaatctggggaggttttcgaagaccgtcaggccaattatgagaaacaggtcaaggcc
caagaacgtcttgtatccaacgcccaagtggtcgcagatgccattggcgttgaaatgccc
gatttgaaggattcggatgattcacttgctgcgtccaacggatccattggtcttgtcaag
acaggcgattacctgcgttccatgggagacggcgcaggaatctgggaggacgacgacgag
cgccgcttctacgaaaacctagttgatcttaaaggaaaagtaccagctattctactggag
gatggtaaaaagaagaagacggacacagatgaacaagtgggcaagaaattagacccggcc
gaagtgcccgaaaccacaaagattgccgaaaccgccgacgatcagtctacatctattgca
aaccgaacaattggtgcgcaagtcgacgctctgcttgcccgtctacctgagttgacaaat
aaggacattgttgaccagacggctatcgacttttgtttcctcaactccaaggcttcgcgc
aaccgtcttgtcaaggccttgactgaagttccaaaaggccgaagcgatttgctgccatcc
tggtctcgactcgttgctaccttgggacgatacatgcctgatgttccgaaaggtcttgtc
gattacctggatgctgagttccgaagcttgcaaaggcgaaaagagaaggactttttgggt
caggtccgcctgagtaacattcgctatcttgctgaattaacaaaatttggcattgttcct
gagcatgtcgtcttccattgtttgaaggtcagtctcgacgacttttcgcgcatgaatatc
gagattctttgcaaccttatcgagaattgtggtcggtacctgcttcgaaatccggaaaca
gccccgcgtatgatgagctttcttgaaactcttcagcgcaagaagtctgttcagcatatt
gggcagccggagcgcatgcttatcgacaatgccgtctattacgttgatccaccagagcga
tcagctatcgagcaaaaggaacgcactcctatggaactcttcgttcgcaaattgatctat
gttgatatgactaagagaaattatagcaagatcttgaagcagattcgaagacttcactgg
gaggaagcagaggtggttgccattttggagaaggtgttttccaagcctggaaaggtcaag
tacggaagtgttcacctccttggaatcctgctcagcgcgctctatcgttatcatcctgcc
tttgtagtgaaggtcatcgataacgtgatcgagtcaatgacgtttggccttgagcagaac
gactacagattctatcaacgacgcattgctgaagtaaagtatcttggagagctctacaac
taccgtatgctcgaacaccctgtcatctttgacactatgtacaaaatcatgacgttcgga
tacggcggaccgcccgttcctggcaaatatagcccacttgaccctcccgacgacttcttc
cgaattcgtcttgtttccacgatgctagagacatgcggcatgttctttaatcgtggggcc
gcgggtaagaagctggactacttcctctccttcttccagtactacatctttaccaaggcg
tctttgcctatggatatcgagttcctggtacatgatacatttgctcttacgcgcccacag
tggaagattgcctctggattggaggaggcggtcaaagcctttcaacttgctgttgcccag
gaccagaagtcagcaggtgtcgataagggagtcgatgtggacgacgcaacaagtgacgcc
ttatctgacgatgacaatgatgaagatggtgacgacaacgatgacagtgcttcggaggag
gaggaagtagaagatatggatgaggactcggacagcgatagcgcctttgacgaagaggcc
attgttgtgacccgacaagaagaggaggttgaccctgaagacgaagctgacttcgagcgc
gaatatgccaaaatgatggctgaaagtctcgaatcgcgcaaattcgagcgcaaacagctc
ttcgacgtgccgcttccagttcgatccaagactcgcgaggcgacttcaacagaagggggt
gaaggggaatcccctcccggccacaccatggcattctccctgttgaccaaaagaggcaac
cgccaacagacgcgaactgttgagctgccttctaattcgacatttgctgttgccatgaaa
aaccagcaacaggctgagcgggaggaacagcaacgtatcaagaacttggttcttaattat
gatcttcagcagaatgaagatccagatggtggtacagaccctcaacttccgcaactttat
cgaaacatcaatattcacaacagaaatcaggcaacgaacgaccagcgacgtattatcaca
accgtttag
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integrated database retrieval system
