Fusarium graminearum: FGSG_02781 Help Entry FGSG_02781        CDS       T01038                                  Name (RefSeq) antiviral helicase SKI2   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism fgr  Fusarium graminearum Pathway fgr03018   RNA degradation Brite KEGG Orthology (KO) [BR:fgr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FGSG_02781  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fgr03019]     FGSG_02781 Enzymes [BR:fgr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      FGSG_02781 Messenger RNA biogenesis [BR:fgr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      FGSG_02781   mRNA degradation factors    3'-5' decay     Ski complex      FGSG_02781 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk DEXQc_Suv3 ResIII Helicase_C DUF6211 Cut8 Ski2_beta-barrel Motif Other DBs NCBI-GeneID:  23550139 NCBI-ProteinID:  XP_011323033 UniProt:  I1RGC2 LinkDB All DBs Position 2:<8693920..>8697788 Genome browser AA seq 1271 aa AA seqDB search MASIDALLEGEAQEIGQRQPSTQDPEALKRHLEQLLLSPSPEFSPEWLNRLQQRWDFEAD YTSLYKVAPPHTRTLTRFQRHGLEGRVTGYKNVTVPANSATAKNSTSLSRKPANRADFVR GAAGFFPFAPGGLEGIEATAAFEDSVHTGGIVEPGSAGNKLERVIQLGAEGGLLEIAPGM SRGIDFAKKKTNVSQEDANAIKEVLEEEPEEAKIGPKGDDEVSPDTVTPEPNADSGEDGD DIDDILPVEFPALEPHGVLAASSARKAGREWAHMVDINHDMSNFRELVPDMAREWPFELD TFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRD FRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADIIRDVEFVIFDEVHYVNDFE RGVVWEEVIIMLPEHVSLILLSATVPNTKEFASWVGRTKQKDIYVISTPKRPVPLEHYLW AGKDIHKIVDSEKKFIEKGWKDAHFAIQGRDKQKPAETTVATRGGNPRGNQRGGTQRGGP QRGGRGGGQQRGGNQQRGRGGPPRASHAPGHMGRGGRAGGFTSVAQDKNLWVHLVQYLKK QTLLPACIFVFSKKRCEENADALSNQDFCTASEKSHIHMIIEKSVARLKPDDRQLPQIIR LRELLSRGIAVHHGGLLPIVKELVEILFAQTLVKVLFATETFAMGLNLPTRTVVFSGYRK HDGHSFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGLDDAPPVADLRNMILGEPSKL RSQFRLTYNMILNLLRVEALKIEEMIKRSFSEHATQQLLPEHEKDVKLAQADLAKVKRDS CEICDVSMDECHQASQDFKRLTFDLYKGLLAIPIGRRMFSQHRLVVFNWDGIRSVGILLA DGISNKGTSEDPTLHLCAIKSLRDRRDATDQLPFVPTFRKYFHELPKSKKRVQTKTLHVP LSDVECLTRWVTKGIVPEIFQGGDGYHQAKDRLQELCGSWDDRLEELDLSRIKQLQLQEI VETRVGLIKTISDSPAEKCSEFLKHFAMCHDEWLIKEHISQLKQSLSDQNLQLLPDYEQR VQVLKELGFIDDATRIQLKGKVACEVHSGDELVLTELILDNVLADYEPAEIAALLSAFVF QEKTDMEPSLTGNLERGKETIVSISEKVNDVQTRLQVIQSADDSNDFVSRPRFGLMEVVY EWARGMSFKNITGLTDVLEGTIVRTITRLDETCREVKNAARIVGDPELYQKMQQAQEMIK RDITAVASLYM NT seq 3816 nt NT seq  +upstreamnt  +downstreamnt atggcttctatcgatgctctccttgagggagaagctcaagaaattggccagcgtcaacct tcaacccaggatcctgaggcgctcaagcgtcatctagagcagcttctcctctcgccttcg ccggagttctcaccggagtggctgaaccgtttacaacagcgatgggacttcgaggccgac tacacatctctatacaaagttgcaccaccacatactcgaacactaaccagatttcagcgt catggattggagggtcgcgttacaggctacaagaacgttacagtccctgcaaacagtgca acagccaagaactcgaccagtctttctagaaagcctgcaaaccgcgctgactttgtaagg ggtgctgcaggcttcttcccgttcgcgcctggtggtcttgaaggtattgaggcgacagca gcattcgaggactcagttcacacaggaggtatcgtagagccaggcagtgctggaaacaaa ctggaacgagtaatacaacttggcgctgaaggtggactattggagattgctcctggaatg agccggggtatcgacttcgcgaagaaaaagacaaatgttagccaagaggatgcgaatgct atcaaggaagtgctcgaggaggaacccgaggaagccaagattggccccaagggtgacgac gaagtttcaccagacaccgttacgccagagccaaatgcagactccggagaggatggggat gatatcgacgacatcttgccggtagaattccctgctctggagccccatggagtcctcgca gcttcgagtgctcgcaaagctggacgtgagtgggcgcacatggttgacatcaatcacgac atgtccaatttcagagagctcgtacctgatatggctagagaatggccatttgaactcgac acttttcaaaaggaagcagtataccacctggaaaacggcgattcggtttttgttgcagcg catacctcagctggcaagactgtcgtggcagagtatgcgattgcactggctgctaagcat atgacgaaagcaatttatacttcgccgatcaaagcattgagcaaccaaaagttccgcgat ttccgacaaacatttgatgaggtgggcatcctcactggtgatgttcagatcaatcctgaa gccagctgcctgatcatgacgacggaaattcttcgaagcatgctttatcgaggagctgat atcattcgggatgtcgagttcgttatctttgatgaagttcactacgtcaacgactttgaa cgaggtgttgtctgggaagaagttatcataatgttgcctgagcacgtgtcactcatcctg ctgtcagcgactgttccgaacactaaagaatttgcctcgtgggtcggtcggacgaaacaa aaggatatctacgttatctctactccaaagagacctgtgcctcttgaacattacctttgg gctgggaaagacatccataagattgtggattcggaaaagaagttcatcgaaaagggttgg aaagatgcacactttgctattcaggggagggacaagcaaaaacctgcagaaactaccgtt gctacgcgtggaggtaaccctcgtggcaaccaacgcggcggtactcaacgaggagggccc caacgaggcggtcgaggtggaggacagcaaagaggaggcaatcaacagcgtggtcgcgga ggtccaccccgtgcaagtcatgcgcctggtcatatgggtcgtggcggtcgtgcaggtggc ttcacatctgttgcgcaggacaagaacctctgggttcatctcgttcaatacctcaagaag cagaccctgcttccagcctgtatcttcgtgttttcgaagaagagatgtgaagagaacgcc gatgccctcagcaaccaagatttctgcacagcatccgagaagagccatattcacatgatc atcgaaaagtcagtcgcacggctgaaaccagatgatagacaacttccgcagattatcagg ctgagggaattgttgagcagaggcatagctgttcaccatggtggactattgcccattgtc aaagaattggtcgaaatcctgtttgctcagacactggtgaaagtgctgtttgccacagaa acgttcgctatgggcctgaatctccctacacgcacagtggtcttctcgggataccgcaaa cacgacggacattcattccggaatttgctgcctggagaatacactcaaatggctggccga gctggtcgtcgtggcttggacactgttggatctgtcattatcgtaccgccagggggtctc gacgacgcgcctcccgttgcagacctgcgcaacatgatcttgggagagccttcaaaacta cgttcgcaattccggttgacatacaacatgatcctgaacctccttcgagtagaggcatta aagattgaggagatgatcaagcgcagtttctctgaacatgccactcagcagttgcttccc gagcatgagaaggatgtgaaactagcacaggcagatctggccaaagtcaagcgggactct tgtgagatttgtgatgtttcaatggacgaatgccaccaagcatctcaggacttcaaaagg ctcacattcgacctatacaagggcctgttggccatccctataggacgaagaatgttctcc caacaccgccttgtggtgttcaattgggatggtatccgctcagttggtattcttctggca gatgggattagcaacaagggcacgtcggaagatccaacactccatctatgcgccatcaag tcccttcgagaccgacgcgatgccactgaccagcttccattcgttcctactttccggaaa tacttccatgagctcccaaagagcaagaagcgagtgcaaactaaaactcttcatgtccct ctaagcgacgtagaatgtcttacaagatgggtaacaaagggcatcgtccctgagatcttc cagggtggagatggttaccatcaagcgaaggatcgcctccaagaactatgtggctcatgg gatgacagattggaagagctggatttgtctcgaatcaagcaattacaacttcaggagatt gtagagacgagggttggcttgattaagacgatatctgactcacctgccgagaagtgctcg gagtttttgaagcatttcgccatgtgtcacgatgaatggctcattaaggaacatatctct cagctgaagcagtcgctatcggaccagaatctacaacttctgcccgattacgagcagcga gttcaagtgcttaaggagcttggtttcattgatgacgccactcgcattcagctcaagggc aaggttgcatgtgaagtccattccggtgatgagttggttctcactgaactcattctcgac aacgttcttgccgactacgaaccagccgaaattgccgccctgttgtccgcttttgtgttc caagaaaagaccgacatggaaccgtctttgactggcaatctcgagcgtggaaaagaaact attgtctctatttccgagaaagtcaacgacgtacaaactcgattgcaggtgatccagtct gctgatgactccaacgatttcgtgtctcgaccacgattcggcctcatggaggtggtgtac gaatgggctcgaggcatgagcttcaagaacatcaccggcttgaccgacgttttggagggt actattgtgcgaacaattacacgactagatgagacatgtcgcgaggtgaagaatgcagcc aggatcgtgggtgacccagaactgtaccagaagatgcagcaggctcaggaaatgatcaag agggacatcacagcagtggcaagtctttacatgtag

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