Fusarium graminearum: FGSG_04996
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Entry
FGSG_04996 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FGSG_04996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_04996
Enzymes [BR:
fgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
FGSG_04996
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
FGSG_04996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
IstB_IS21
nSTAND3
ATP_bind_1
CbiA
AAA_22
AAA
SRPRB
AAA_30
AAA_24
SRP54
Motif
Other DBs
NCBI-GeneID:
23552193
NCBI-ProteinID:
XP_011323475
LinkDB
All DBs
Position
3:complement(<847604..>849104)
Genome browser
AA seq
454 aa
AA seq
DB search
MSIPGLGQIPSQPTITATNRVVTLRPLCEWRFQTSQASPVIVKLLSGTAEKDGVELGPKN
AYTFAGVKSKILTWHGCELEIDGRCDAESVAEYANPTDNPANTHMNLHGQLNDMRQAAAR
EGREGPRALIVGPADVGKTTLARTLTSYATRQGYQPLVVNANPREGLLSLPGTLSASVLA
TILDPEAVDGWGSTPTSGPSSVPVKLPLVFYYGQTSPDQDPDFYRELTSKLAGSVSARLS
EDQDVKSSGVIIDGMGLTEQSKDGHELVAHIVDEFSETVNVIIVVGSPAISSELSRRFGT
ERTSLGEPISVVPIDKSDGVVVRDEAFLQHVREAAIKEYFYGDSRRTLSPLIQQVDFDNV
VVYHTSDEHSYPDQGITREDPCTPMQHWTLAVMNAAPKDAPDVVRAASVMGFLYVSDVDE
ERRKIKLLAPVSGRLGDQPLVWGKWPEPYINLLG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattccaggcttgggccagattccctcacagcccaccatcaccgcgacaaaccgc
gtcgtcacactccgacctctatgcgaatggcgcttccaaacctcccaggcctcccccgtc
atcgtcaagctcctctccggaacagctgaaaaggatggcgtcgaattaggtcctaagaac
gcctacaccttcgcgggcgtcaagtcaaagatcctcacctggcacggctgcgagctcgag
atcgacggccgctgcgacgccgagtctgtcgccgaatatgcgaacccgaccgataaccca
gccaatacgcacatgaacctccacggacagctcaatgatatgcgacaggcggccgctaga
gagggcagagaaggacctagagcgcttatcgtgggaccggcggacgtgggaaagacgacg
ttggcaaggaccttgacgagctatgcgacaagacagggatatcagcctttggtggtgaac
gcgaacccaagagagggtctgctcagtttgcccggcacgctgagtgctagcgttctcgcg
accatcttggaccccgaagccgtggatggctggggaagtactcctaccagcggaccaagc
agcgtacctgtaaagctacctttggtgttttactacggacagacctcgcctgatcaggac
cctgacttttatcgcgaacttacgagtaaacttgctggaagcgttagtgcacgcttgagc
gaggatcaggacgtcaagagctcgggtgttatcatcgatggcatgggtctcacagagcaa
agcaaagatggacacgagcttgtagcgcacattgtcgacgaattttcagaaacagtcaat
gttattatcgtggttggctccccagccatcagctccgagctatctaggcgattcggcacc
gagcgaacaagcctgggagagcccatcagcgttgttccgatcgacaagtccgacggtgta
gtcgtccgcgacgaagcattcctacagcacgtgagagaagctgccatcaaagagtacttc
tacggcgactctagacgaactctcagccccctgatccaacaagtcgactttgacaatgtc
gttgtgtaccacacctccgacgaacattcttatcctgaccagggtattacacgggaagac
ccatgtacgccgatgcagcactggacgcttgctgtgatgaatgcagcgcccaaggacgcg
cctgatgtagttcgggctgcgagcgtgatgggatttttgtacgtatcggatgtggatgag
gagcgtcgcaagatcaagttgcttgcgccggtgagcggacggttgggtgatcagccgctt
gtgtgggggaagtggccagagccatacatcaacctcctcggataa
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