Fusarium graminearum: FGSG_05002
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Entry
FGSG_05002 CDS
T01038
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_05002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fgr03041
]
FGSG_05002
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FGSG_05002
Spliceosome [BR:
fgr03041
]
Complex C
Other components
Step II factors
FGSG_05002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
DEAD
AAA_22
AAA_19
T2SSE
AAA_30
nSTAND3
nSTAND_NTPase5
Cas3-like_C_2
ABC_tran
SRP54
AAA_16
PhoH
TsaE
Motif
Other DBs
NCBI-GeneID:
23552199
NCBI-ProteinID:
XP_011323481
UniProt:
I1RM25
LinkDB
All DBs
Position
3:<861262..>864849
Genome browser
AA seq
1195 aa
AA seq
DB search
MDDLLNLELLSLVSKVTSEVQNHLGVGEKTVAEFLIAKRTECNSFDEFRDNLETSTPGLP
PSLVESIDRLVLALHPKFKGKAKDEQKEHPSRTLQEKEKVFSGLALPDKEPARDDGADAI
DDTLALLEGLEPKAKKEKPTRKRSRSPENDQKEFRRRRRDRSRSRERRKRDKYRSRSRSQ
ERGDEDWRDGYRDSRKDRRGRKRHDDDDRFRNAPAPEVDDSPQLHKVYQGHVTGLKDFGC
FVNLHNVKGRVDGLVHVSRMSTGQRVNHPSDLVTQGQEVWVKVTSLDKDQNGRDRVGLSM
KDVDQQNGQDLEPQVRMSTGANMEALGGGARDGFAEPSGMPRNDMGPPRRQKKRMTSPER
WEIRQLIASGVAKASDYPDLEEDYNATLRGDGELELEEDVDIEVREEEPPFLAGQTKQSL
ELSPIRVVKAPDGSMNRAAMSGTNLAKERKELKQQEADAAAKDEPKENLSQQWQDPMADP
DKRKFASDLRNARKNQPAEDVPEWKKAVIPKGQSLGKRTNMSIKDQRESLPVFAFRTQLI
KAVHENQILIVVGETGSGKTTQLTQYLAEAGFANDGMIGCTQPRRVAAMSVAKRVAEEVG
CKLGEEVGYTIRFEDCTSPSTKIKYMTDGMLQREILVDPDMSRYSCIMLDEAHERTIATD
VLFALLKKTLKRRPDMKVIVTSATLDADKFSAYFNECPIFTIPGRTFPVEVLYSREPESD
YLDTALVTVMQIHLTEPKGDILLFLTGQEEIDTACEVLFERMKALGPNVPDLIILPVYAS
LPTEMQSRIFDPAPPGSRKVVIATNIAETSITIDEIYYVVDPGFVKQNAYDPKLGMDSLV
VTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSTTILMLKAM
GINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLAKVLIA
AVDLDCAEEVLSIVSMLNIPTVFYRPKEKQSQADQKKAKFHDPHGDHLTFLNVYNSWKTS
GYSAPWCFENFIQARSMRRAKDVRDQIVKIMDRYKHPIRSCGRATEKVRRALCAGFFRNA
ARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHELVLTSKEYMHCTTSIEPKWLVE
AAPTFFKVAPTDRLSKRKKAERIQPLYNKFATEDDWRLSAQRKGGRGGGGGGTWG
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttgttgaatcttgagcttttgtcccttgtttcaaaggtgacttcagaagtg
cagaaccatctgggtgttggcgaaaagactgtagctgaattcctgattgccaaacgtaca
gaatgcaatagtttcgacgaattccgcgacaacctcgagacgtccactcccggcttgcct
cctagtcttgttgaaagtatagaccgactggtgctcgctttgcatcccaagtttaaaggc
aaagcgaaagacgaacaaaaggaacacccctcccgaacccttcaagagaaagaaaaggtc
tttagcggtcttgcgctacccgataaggaacctgcgcgcgacgatggagccgatgccatt
gacgataccctcgcgctcttggagggcctagaaccaaaggcgaaaaaagaaaaacccacg
agaaaacggagccgaagccctgagaacgatcaaaaagagtttaggagaaggagaagagat
agatcccgttcgagggaacgacgaaaacgagacaagtatcggtcaaggtcacgatcacaa
gaacgaggcgatgaagattggcgcgacggataccgcgattcgcgcaaagatcgacgaggt
cgcaaacgacacgacgatgacgatcgattccgcaacgccccggcgcccgaagtagatgat
tcaccgcagcttcacaaggtctatcaaggtcatgtcacaggtctgaaagactttggttgc
tttgtcaacttgcataatgtgaaaggacgagttgatggtttggttcacgtgtctcgaatg
tctacagggcagcgcgtcaatcatccttccgatttggtgacgcagggacaggaagtctgg
gtcaaggttactagtcttgacaaggatcaaaacggccgcgatcgagtgggattatcgatg
aaggatgttgatcagcagaatggacaggacttggagccacaagttcgtatgtcgacaggt
gccaacatggaagcactgggaggaggcgcaagagacggatttgcagagccaagcggaatg
cctcgaaacgatatgggtccccctcgacgacaaaagaagcggatgacttctcctgaaaga
tgggagattcgacaactgatcgcatccggagtggccaaggcttctgattatcccgacctg
gaggaagactacaacgccactctccgtggcgacggcgagctggagctggaagaggatgtc
gacattgaagtccgtgaggaagaaccacctttcttggctggacagaccaagcaatctctg
gagctctctccaattcgcgtcgtcaaggcaccagatggctctatgaaccgagcagcaatg
tcaggcaccaacttggcaaaagaacgcaaggagctgaaacaacaagaggccgatgctgct
gccaaggatgaacctaaagagaacctttctcagcaatggcaggaccccatggccgatccc
gacaagagaaagtttgctagcgatttgcgaaacgctaggaagaaccagcccgctgaggat
gtccccgaatggaaaaaggcagtcattcccaagggacaatcgctgggcaagcgtacaaat
atgagcatcaaggatcagagagagtctctgcctgtgtttgccttccgtactcagctgatc
aaggctgtccacgagaaccagatccttattgtcgttggagagacaggatccggaaagacg
acacaattgacgcaatatcttgctgaagccggcttcgccaacgatggtatgattggatgt
acgcaaccccgtcgtgttgccgccatgtcagttgccaaacgtgtagctgaggaagtcggc
tgcaagcttggtgaagaggttggatacacgattcgattcgaggattgcaccagcccgtcc
acaaagatcaagtacatgaccgatggtatgcttcagagagagattctggttgaccctgac
atgagccggtattcgtgcatcatgcttgacgaagcccacgaacgtaccattgccactgat
gtactgtttgctctcctcaaaaagaccttgaagcgtcgtcctgatatgaaggtaattgtc
acatcagcgacactcgacgcagacaaattctctgcatactttaacgaatgccccatcttt
actatccccggtcgaacctttcctgtcgaagtgctttactctagggaacccgaatctgat
tacctggatactgctctcgtcacggtgatgcagattcatcttaccgaacccaagggcgat
atcctgctcttcttgacaggccaggaagaaattgatacagcctgtgaggtcttgtttgag
agaatgaaagccttggggcccaacgtgccagacttgatcattctacccgtctacgcgtct
cttccaacagaaatgcagagtcgaattttcgatcccgctccgccgggcagtcgcaaggtt
gtcatcgccaccaatattgcagagacatccatcactattgacgagatttactacgtcgtc
gacccaggattcgtaaagcaaaatgcctacgatcccaagcttggtatggactcactggtt
gttacgcctatttctcaggcccaggcaaatcagagagctggtcgtgctggccgaacaggt
cctggaaagtgtttccgcctgtataccgaggcagcttaccagtccgaaatgcttccgacc
accatccctgaaatccaacgccagaacctgtctaccacgattcttatgctcaaggccatg
ggtatcaatgacctcctccactttgactttatggacccgcccccaattaataccatgctt
accgcgttggaggagctatacgccctcagtgctcttgatgacgaaggtctactcacgcgt
ttgggacgaaaaatggccgatttccctatggaaccttctctcgccaaggttcttatcgct
gctgttgatctcgactgcgccgaagaagtgcttagcattgtgtccatgctgaatatcccg
actgtcttttaccgccccaaggagaagcagtcccaggcagaccaaaagaaggcaaagttc
cacgacccccacggcgaccacttgactttccttaatgtgtacaactcttggaaaacgagt
ggctactcagcaccgtggtgttttgagaactttatccaggcgcgatccatgcgccgagcc
aaggatgtccgcgatcaaattgtcaagatcatggaccgatacaagcaccctataagatca
tgcggccgcgctacagaaaaggtccgtcgggctctctgcgcaggattctttcgcaacgcc
gcccgcaaggacccccaggagggatacaagacccttattgagggtactcccgtctatctg
catcctagctcggcactcttcggcaagcaagccgagtgggtcatctaccacgaacttgtc
ctcactagcaaggagtacatgcactgcacgacgagcattgagccgaaatggctcgttgag
gccgcgcccacatttttcaaggtcgcacctacggatagattgagtaagaggaagaaggcg
gagaggatccagccgctttataataaattcgctacagaggatgattggcgattgagtgcg
cagaggaagggtggtagaggtggtggtggtggaggtacttggggttaa
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