Fusarium graminearum: FGSG_05424
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Entry
FGSG_05424 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
fgr
Fusarium graminearum
Pathway
fgr03013
Nucleocytoplasmic transport
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_05424
09122 Translation
03013 Nucleocytoplasmic transport
FGSG_05424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_05424
03041 Spliceosome [BR:
fgr03041
]
FGSG_05424
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
FGSG_05424
Spliceosome [BR:
fgr03041
]
Complex C
Other components
EJC/TREX
FGSG_05424
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FGSG_05424
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
23552607
NCBI-ProteinID:
XP_011323960
UniProt:
I1RN60
LinkDB
All DBs
Position
3:<2234758..>2237452
Genome browser
AA seq
826 aa
AA seq
DB search
MAVQDTDNPAAPAISAFTILLDDLLSQAERSKQSATIEPALRKSDFDDLSGRITTTAAEV
ASPADESAKPANDKGQQFAIIETAARNIFSHLIATTTIDSPDYVKVWNLLDILSILSDDG
QCDPALLFWLAEELLDSQTIAGCRKIFDFLESRRERITANHFKQKQLIILRTCNELLRRL
SRAEDTAFCGRVFIFMFQSFPLGDKSSVNLRGEYHVENITTYEQGTADDDFRMALDGPDE
QPKELSESKTTPKSTDAKKEDKEKPLPTDVLYPLFWSLQEYFSQPKKLFETTSLSSFKES
LAATMNVFQTVHNDSKRSLKRKRETGEEDESFNTFNPKYLTSKDLFDLEISDLSFRRHIL
VQALIIMDFLLALSKLSRDKLTETLPATAIINKAVMYGDQVLIEEDAKWASDTKRTIADY
LRQGPDGPYFYRMVETVLARDKNWVRWKIEGCQPIKRDPVAPPVFVEAKGNVQRLATSKR
LRAVPMGSVSLDFLREEDAEAAMGRLKAKERYELPELDAFKRKIADDDFEIEMPTNDQTK
AAAVSGKASKSWRALRIAARTKLAAFDKIEDPKKIDIVFEELTEADDEGDAAEPTASDED
MPTTREPIIVSGITGVGCSAIINKLMEERKGVFATVVRHTTREPLDGEVNGKTFHFVKQQ
EFNQLRDGDRLIESGTRNGVDYGTSSKAIEAITETGKVPIIELDIEAAQYAKDMGFEARY
VLIKASTPEVLEQRLKALGKEDSTIQEILKRLPTELEPEKADELFNATIVDDDEQAAVKI
LDDYVYAKSEDEPTAEPGSGEDTAMKEDDEAIAEDTETKEATMTDA
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcaagatacagacaatccggccgctccggcaatttctgccttcacaatacta
ctggacgaccttctttcacaggcagagaggtcaaaacaaagtgcgactatcgaaccagca
ttgcgcaagtctgatttcgacgacctctcgggacgaatcaccacaactgcagccgaagtt
gctagcccagccgacgaaagcgccaagccagcgaacgataagggtcagcagttcgccata
atagaaactgctgcccgtaacatattcagtcatcttattgcgacaactaccatcgattcc
cccgattatgtcaaagtgtggaatctcctcgacattctttccattctttccgacgacggc
caatgcgatcctgcactcttgttctggctagctgaagagcttctagatagccaaactatt
gccggatgtcgtaagatctttgatttcctcgaatcaaggcgagagcgaatcacagcgaac
cacttcaagcagaaacagttgattatcctccgaacatgtaacgaattgctccgccggtta
tcccgcgcagaagatactgctttttgtggtcgagtctttatcttcatgtttcagagcttt
cccctcggggacaagagctccgtgaacctgcgaggcgaataccatgtcgaaaacatcacg
acgtacgagcaaggaactgctgacgacgatttccgaatggctttggatgggccagacgag
caaccaaaggagctgtcagagtcaaaaaccacacccaagtcaacagatgccaaaaaggaa
gacaaggagaagcctctcccgaccgacgtgctatacccattgttctggtctcttcaagaa
tacttcagtcagccaaagaagctttttgaaacaacgagtctttcctccttcaaagagagt
ctggcggcgacgatgaatgttttccagacagttcataatgattccaagcggagcctcaag
cggaaacgagaaaccggcgaagaagacgagagtttcaatacattcaaccccaaatacctc
actagcaaagacttgttcgacttggagatcagtgacctatcattccgacgacatattcta
gtgcaagccctcatcatcatggattttcttcttgcgttatccaagctatcacgagacaag
cttacggaaactttgccagccacggccatcataaacaaggctgtcatgtatggcgatcag
gtcttgattgaagaggatgccaaatgggcgagtgatacgaagaggactatcgcagattat
ctccgtcagggccctgatggaccatacttttatcgaatggtagaaaccgtcctggctagg
gacaagaactgggttcgctggaagattgaaggctgtcaacccatcaaacgcgatcccgtc
gcgccgccggtctttgtagaggcgaagggtaatgtccaacgcttggccaccagcaagcga
ttaagagcagtccctatgggttctgtctctttggactttctcagggaagaggatgcggag
gcagctatgggtcgactcaaagccaaagagaggtacgagcttccagagcttgatgcattc
aaacgaaaaattgccgatgacgactttgagattgagatgccgacgaacgatcaaacaaag
gccgctgccgtttctggtaaggccagcaagagctggagagctctgcgcattgcggcacgt
acaaagctcgccgcgtttgacaagattgaagatcctaaaaagattgacatcgtttttgag
gaactcaccgaggccgatgatgaaggggacgctgctgaacctacagccagtgatgaggac
atgcccacaacccgagaacccatcattgtctcgggtatcacaggtgtcggctgttcagca
atcatcaataagttgatggaggagaggaagggtgttttcgctactgttgtcaggcacact
acacgagaaccgcttgacggtgaagtcaacggcaaaaccttccactttgtcaagcaacaa
gagttcaatcagctccgtgatggcgatcgtctgatagaatcaggtactcgcaatggggtt
gactacggaactagctccaaagctatcgaagctatcacagagacgggcaaagtccccatc
atcgagttggatatcgaggctgcgcagtacgccaaggatatgggctttgaagcacgctat
gtactcatcaaggcctcaactccagaagtactcgagcagcgtctcaaggctttaggcaaa
gaagactctactatccaagagatattgaagagactgccgacagagctcgaaccagagaag
gcagacgagctattcaacgcgactattgtcgacgatgacgagcaagcagcagtcaaaatt
ctcgatgactatgtctacgcgaagagtgaggatgagcctactgcagagcctggctcgggg
gaggacacggctatgaaggaagatgatgaagcaattgccgaggataccgagacaaaggag
gctacaatgacggatgcgtaa
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