Fusarium graminearum: FGSG_05565
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Entry
FGSG_05565 CDS
T01038
Name
(RefSeq) CCR4-NOT transcription complex subunit 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_05565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_05565
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FGSG_05565
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FGSG_05565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
23552743
NCBI-ProteinID:
XP_011324116
UniProt:
I1RNI4
LinkDB
All DBs
Position
3:<2704716..>2706218
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AA seq
482 aa
AA seq
DB search
MPPPQLRGFGGGPAVAAPYHQGGFPSHGQPQGGMPGANQYMNANAQLGPFSANGNAFTSG
LNSLNTQGFADTGFGSQSARMGFHGPAAALQQSQHGLHQNMLMEHPTIRSQPNKGRIREV
WKHNLHEEMAVLRDLVDKYPYIAMDTEFPGVVSRPMGGFRGKSDYHYQCLRTNVDMLKVI
QIGLTFFNEDGETPPARPTNDLKLGTAAQKAATNAPFPCSWQFNFKFSITDDMYNEKSIE
SLQQAGINFELLDRDGIDPHEFASLLIPSGLVCFDNVRWISFHGGYDFGYLTKLLICLPL
PNDEVDFDHKMKLYFPTTYDVKHLMKHAIRLHNSGLLTPSDPSSAEILQKFEHKSGLENI
AETLKIKRVGSAHQAGSDSLLTGKVFFSMRDKIFAGDIPDEHVGKVWGLGFPDSNSNIIS
MNQQNNNDGQTNGNAPSTPNTTSVGLATTPGPQGHNGILNTGPMTPGGGGGVFGSFAFGG
NR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcaacttaggggcttcggcggggggcctgctgtagcagcgccatatcac
caaggcggcttcccctcccatggccaaccgcagggtggtatgccaggcgcaaaccagtac
atgaacgccaatgcccagcttggacccttctctgccaacgggaatgcgttcacgtctggt
ctcaacagtctcaacacgcaaggattcgccgatacaggatttggaagccagagcgcaaga
atgggcttccacggccctgctgccgcactacaacaatcacagcatgggcttcaccagaac
atgttgatggagcaccccacaatcaggtcgcagcctaacaagggcaggatacgggaggtg
tggaaacataacctgcatgaggaaatggccgtgttgcgagatctggtggataagtaccct
tacattgccatggatactgagtttccgggtgtcgtttcgaggcccatgggaggatttcga
gggaagagcgactaccactaccaatgtctacgaaccaacgtcgacatgctcaaggtcata
caaataggcctcacattcttcaacgaggatggcgaaaccccaccagcacgaccaacgaac
gacctaaagctcggcacagctgcgcaaaaggctgcaaccaatgctcctttcccttgttcg
tggcagtttaacttcaagttctccattaccgacgatatgtacaacgagaaatcaatcgag
tcacttcagcaagccggtatcaacttcgaattgcttgatcgcgatggcattgatcctcac
gagttcgcatctctcctcatcccttctggtctagtgtgcttcgataatgtgaggtggatt
tccttccacggtggttacgatttcggctacctcaccaaacttctgatctgtttaccctta
cctaatgatgaggttgattttgatcacaagatgaaactctatttccccacgacatatgac
gtgaagcatcttatgaagcatgcgatccgactacacaactcgggtctcctcacacccagt
gatcccagtagcgctgagatcttgcaaaagtttgagcacaagtcaggactggaaaatatc
gcagaaaccctcaagattaagcgtgtcggtagtgcgcatcaagcaggctctgactcgctg
ctcaccggaaaggtttttttctctatgcgcgacaagatctttgccggtgacatccctgac
gagcacgttggtaaagtttggggtcttggattccccgactccaactcgaatattatctcg
atgaaccagcaaaacaacaatgatggccagacaaatggcaacgcacccagcacacccaac
actacgagtgtcgggttggctaccacacctggaccccaaggccacaatggtatcctcaac
acaggacctatgacgcctggaggaggtggtggtgtatttggcagctttgcttttggtgga
aaccgataa
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