Fusarium graminearum: FGSG_05858
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Entry
FGSG_05858 CDS
T01038
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03013
Nucleocytoplasmic transport
fgr03015
mRNA surveillance pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_05858
09122 Translation
03013 Nucleocytoplasmic transport
FGSG_05858
03015 mRNA surveillance pathway
FGSG_05858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_05858
03041 Spliceosome [BR:
fgr03041
]
FGSG_05858
03009 Ribosome biogenesis [BR:
fgr03009
]
FGSG_05858
03012 Translation factors [BR:
fgr03012
]
FGSG_05858
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGSG_05858
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FGSG_05858
mRNA cycle factors
Stress granule specific factors
FGSG_05858
Spliceosome [BR:
fgr03041
]
Complex C
Other components
EJC/TREX
FGSG_05858
Ribosome biogenesis [BR:
fgr03009
]
Eukaryotic type
90S particles
Helicases
FGSG_05858
Translation factors [BR:
fgr03012
]
Eukaryotic type
Initiation factors
eIF-4
FGSG_05858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Gp6_2nd
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
23553015
NCBI-ProteinID:
XP_011324459
UniProt:
Q4IAA0
A0A1I9FU53
LinkDB
All DBs
Position
3:<3580272..>3581574
Genome browser
AA seq
401 aa
AA seq
DB search
MAEGSGIDRKADERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQ
VCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGD
YMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADE
LLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGL
KQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDM
PQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRF
GRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcaggaattgatcgcaaggccgatgagaggatggagttttccacctct
aaggaggttacagtccatcctactttcgagtctatgtcactgaaggagaacctccttcgc
ggtatctacgcttacggatacgagtctccttccgctgttcaatctcgagccatcgtccag
gtctgcaagggtcgtgacaccatcgcccaggctcagtccggtactggaaagactgctacc
ttttccatcagtatgctgcaagtcatcgacaccgcggttcgcgagacacaggcccttgtt
ctgtcgccgacacgagaattggcaactcagatccagtccgtcgtcatggcgctgggtgac
tacatgaacgtccaatgccacgcttgtatcggaggaacaaacgttggtgaagatatccgc
aagctcgactacggccagcacattgtctctggtaccccaggccgtgtggcggacatgatt
cggcgacgacacttgcgcactagacatatcaagatgttggtcctcgatgaagctgacgag
ctcctcaacaagggattccgagagcagatctacgatgtttaccgataccttccccctgcc
acccaggttgtggtcgtcagtgccaccctgccttacgatgttctcgatatgactaccaag
ttcatgaccgatcccgttcgtattctcgtcaagcgtgacgaattgaccctcgaaggtctc
aagcagtacttcatcgccgtcgagaaggaggactggaagtttgatactctatgcgatctc
tacgacaccctcactatcacacaagctgtcattttctgcaacacacgccgcaaggttgac
tggctcaccgacaagatgcgcgaggccaactttaccgtcagcagcatgcacggcgatatg
ccccagaaggagcgagacagcattatgcaggatttccgtcagggtaacagccgagtgctc
atctcgactgacgtgtgggcccgtggtatcgatgtccagcaggtcagtctggtcatcaac
tacgacctgcccagtaaccgtgagaactacatccaccgtattggtcgtagtggacgattc
ggtcgcaagggtgttgctattaacttcgttaccaccgaagacgtgcgcatcttgagagat
attgaattgtactattccacccagatcgatgagatgcccatgaacgttgccgatctcatt
gcttaa
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