Fusarium graminearum: FGSG_05954
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Entry
FGSG_05954 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
fgr
Fusarium graminearum
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fgr03016
]
FGSG_05954
Enzymes [BR:
fgr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
FGSG_05954
Transfer RNA biogenesis [BR:
fgr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
FGSG_05954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
DUF7030
Motif
Other DBs
NCBI-GeneID:
23553105
NCBI-ProteinID:
XP_011324565
UniProt:
I1RPI3
LinkDB
All DBs
Position
3:complement(3848497..3850931)
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AA seq
594 aa
AA seq
DB search
MAEIQSSNTKPVGTAPTTDSAGQRQSQQRGPSLHQIYALPAPIRTFPLPAFYPSNPISLF
HVAYAWLGQLWSPPKAEPSAVHIGTWSAATSSVHITDDVSTRALWEQGFYGKGSLSRSEP
NWLKREQVRQGLADAHVSEIMTVQRRQERMRAKWERARLEQEVIRETRLKEAEEAKAREA
KVLKAEEMKLRSQESKDIATPESDKPISLPAALPTYESPVSPAALLSLPNSLADLVQPKS
IQPVTPVVSVPTYASPVCPQTILSLPNSATDIANKPVGEKAAEEFNIFGISGSHMAGLGL
SVDTARSNSANGVVANGAASVISSSSDDEGTRRPKSRRKSVRFSPTVESTTFYFADPPSP
KRAESNGKLNGLSDGRPISPVALNGRKEDAKTEIVSKPVLKNMEHLQLMPEEAFFLNFGL
GALQVTDPASGSQLSSLDLLRLFRQHSYFPPRVEAEDPALQPDDNFLVHYAVYHHFRSLG
FVPRGGIKFGVDWLLYTRGPVFDHAEFGLIVIPSYSDALWKESGKQNPQKTWQWLHGTVR
VLSHVTKSLVLVYVDVPPPSKLEQALEKGVAEALKLYKVREVMVKRWSTNRNRG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgagattcaatcatcaaatacaaagcccgttggtaccgcgcctaccacggattct
gccggccaacggcaatcccagcagcgaggaccatcattgcatcagatctacgcccttccg
gccccgatccgtacattccctctgccggccttttacccgagcaaccccatatctctcttt
catgttgcgtatgcgtggttaggccagctgtggtctccgcccaaggctgagccctcggct
gtgcacatcggaacatggtccgccgctacatcatccgttcacattacggatgatgtctct
acccgagccttgtgggagcaaggcttctatggcaagggtagtctaagtcgtagtgagcca
aattggctcaagcgtgagcaggtccggcaaggacttgctgatgcacatgtcagtgaaatc
atgactgtgcaaagacgtcaagagcgtatgcgcgccaagtgggagcgagcacgtctcgag
caggaggtaattagagagaccagactgaaggaggccgaagaagcgaaagcaagagaagcc
aaggtgctaaaggccgaggaaatgaaattgcgatctcaagagtcgaaagacatcgcaacg
cccgagtctgacaagccaatctcactacccgccgctcttccaacctacgagtcacctgtc
agccctgctgcccttctgtctctaccaaactccttggcagacctggtacagcccaagtcc
attcagcctgtcacacctgttgtttctgtgcccacatatgcctctccagtgtgccctcag
accattctatctctgccaaactcggcgacagatattgccaacaagcctgttggcgaaaag
gctgccgaagagtttaatatctttgggatttctgggtcccatatggctggacttggtttg
tctgtggatactgcgcgttccaactcagccaacggagttgtcgccaatggcgccgcttct
gtgataagttcatcgtctgatgacgaaggcaccaggaggccgaagagccgtcgcaagagt
gttcggttctctcctactgtggagtctaccacgttttacttcgcagaccctccaagcccc
aagcgtgcggagtctaatggcaagctgaatgggctgagcgatggccgccctatctcgcct
gtggctttgaatggacgcaaagaagatgccaaaacggagattgtgagcaagcctgttcta
aagaacatggagcaccttcagcttatgcccgaggaagctttcttcctgaactttggcctg
ggagccttacaagtcaccgaccctgcttctggttctcagttgtcatcgttggatttgttg
agactcttccgacaacattcttactttccccctcgtgttgaggcagaagaccctgccctt
cagcctgacgataactttctggttcactacgccgtgtaccaccacttcagatcccttggt
tttgttcctcgtggcggtatcaagtttggtgttgactggcttttgtacacccgaggacct
gtctttgatcatgctgagtttggattgattgtcattccatcttactccgatgctctttgg
aaggagagtggaaagcagaacccacaaaagacttggcaatggctccatgggactgtgcgc
gtcctttcacatgtcaccaagagtctggtgctggtttatgtggacgtgccccctccatcg
aaactcgagcaggctcttgagaaaggtgttgccgaggccttgaagctatacaaggtcaga
gaggtgatggtcaagcgatggtcgaccaaccgcaacagaggatga
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