Fusarium graminearum: FGSG_06799
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Entry
FGSG_06799 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
fgr
Fusarium graminearum
Pathway
fgr03008
Ribosome biogenesis in eukaryotes
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FGSG_06799
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_06799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_06799
03009 Ribosome biogenesis [BR:
fgr03009
]
FGSG_06799
03016 Transfer RNA biogenesis [BR:
fgr03016
]
FGSG_06799
03036 Chromosome and associated proteins [BR:
fgr03036
]
FGSG_06799
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
FGSG_06799
mRNA degradation factors
5'-3' decay
5' exonucleases
FGSG_06799
Ribosome biogenesis [BR:
fgr03009
]
Eukaryotic type
Pre-60S particles
RNases
FGSG_06799
Transfer RNA biogenesis [BR:
fgr03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
FGSG_06799
Chromosome and associated proteins [BR:
fgr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
FGSG_06799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
XRN1_D2_D3
XRN1_D1
SH3_12
R3H
Phage_holin_T
Creatinase_N
Motif
Other DBs
NCBI-GeneID:
23553914
NCBI-ProteinID:
XP_011326451
LinkDB
All DBs
Position
4:1265027..1269613
Genome browser
AA seq
1405 aa
AA seq
DB search
MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDVSFRLSEEE
MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSRRFRTALDAEKARDKAISEG
VEIPKEEPFDSNCITPGTEFMAKLSQQLRYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEH
KIMEYIRNAKAQPNYNHNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKSKSK
ELEHQNFYLLHLCIVREYLEMEFQELGEEGALSFPFDLERVIDDFILMAFFVGNDFLPNL
PSLHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGELSNTEIDAFESDVSD
EKWYASKQMEKRLENKHAETKAPKGGQLVLTSAQRDLWKQKIRPYISKRSDEPLDLGTSL
KAADRKFVQDLADSMHLQWSTKEDDEGHRHLIVSFPPKNNDDDDEDDEEEEGNLAAYRVM
KTYDKALVIDLTAEDAQKQYDQLYQDKYQGWKTKYYLQKFEEWAPDSYDKELTALCENYV
QGLQWVLYYYYRGIASWPWFYGYHYAPLISDVVKGVGADLNFKKGQPFLPYEQLMGVLPD
RSKKIVPKVYHDLMTNPDSPIVDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLDAMRP
KNELLEPDEKARNGFGVPLKFTYSPEVDFVYPSPLPGVFPEIQNCRCIENIFDLPDVEGL
EYLSGLTSGALLKVDALAGFPTLHTLPYTAQLVEGYGVNVFQADSRNPSVCVTLTGTENR
TKIETWKAKLGQRCYVGYPFLQEAKVIKVQDELFSYELADNGDVMARDHNNREAADWAKE
ADYIENWHAKRLAITIGQVECLVYVHMLKGLIRTEEGALTKEYAENPSLRSTYAAQTIVD
EVVNEDERFIEKEALPIEEEFPRGTRAFFLGDYSYGRPLEVAAHTGNKAEVVVSVLKNKE
QDFAKQIIHQAERSNPYTPSFAVAKQLGIHPLVLSKITSSYQIINSAGLRLNLGLNLKFE
GRKLKVLGYSRKSHTGWEFSGMAIKLIADYMVAFPDFFAAIQREPQKSDVLETDLWKDPA
VASQRVKEIVAWLKKQETSKFERVPLEAEQLDSEIVKALAHVGEQVHAASQEIEIKKLRS
VPRSALLKPSDAEMVLGSQNFTLGDRVTYVSAAGKVPIATRGTVVGISRTATALLLDVVW
DTSFMSGTTLNERAPVFRGQTVASSSVLNTSNKQVVSTSSKSQQRKPVIAAHGGYANVGV
TQYRDAPAPGPLRGGWSGALNGNNSQGRNSPGRGRGNGARGGAPNLMHSTLVYRNGPPNG
AAQGHDANGNGTRGRGGRGRGRGSHHGSPAPDGAPQEQMYGNVPPPASLDQPRGRGRGRG
RGGRGRGGPNRGRGNGGAGGNGSQG
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcccaagttcttcagatggctttccgagcgatatccggccatctctcagctc
attgcagagaaccgaatacccgagttcgactgtctttacctcgacatgaatggtatcatt
cataactgtacccacaaggatgcaggcgaggatgtgtccttccgtcttagcgaggaagaa
atgtttattcgcatattcaattacattgaacatttgtttggaaaaatcaagcccaaacag
ctgttcttcatggctatcgatggtgttgcacctcgagccaagatgaaccagcaacgttcc
cgacgttttcgaacagccctcgatgctgaaaaggcccgtgacaaggccatcagcgaaggt
gtcgaaattcccaaggaggaaccattcgacagcaattgtattacccctggcactgagttt
atggccaaactatctcagcaattgcgatactttgtcaacaagaaggtgtccgaagacacc
gactggcaaggatgcgagatcgttctgtccggccacgaagtccctggtgaaggagaacac
aagatcatggaatacattcgaaacgccaaggctcagcccaactacaaccataacgttcgg
cattgcctttacggtcttgatgccgatctaatcatgcttggtcttctcagtcatgatccc
catttctgtctcctccgagaagaggtaacatttggacgggcttccaagtctaaatccaaa
gagcttgaacatcagaacttctatctccttcatctctgcattgtgagagagtatctcgag
atggaatttcaggagcttggagaggaaggggctctcagcttcccatttgaccttgaaaga
gtcattgacgattttatcttgatggcgttctttgtcggaaatgatttcttaccgaatttg
cccagcttgcacattaatgaaggtgcgctggccaacatgttccggatttacaaatcaatt
cttcctaaatgcgatggatatatcaacgagaacggagttatcaatatgggacgactacag
cgcctcttgggcgaattgtccaacacggagattgatgcgttcgagagcgatgtttcagac
gagaaatggtatgcatcaaagcagatggaaaagagacttgaaaacaagcatgccgagaca
aaggcgccgaaaggaggtcagcttgtactcacttcagcgcagcgcgacctgtggaagcaa
aagattcgaccatacatctccaagcgctcagacgaacccctggatctcggcaccagtctc
aaggctgctgaccgcaagtttgttcaggatttggcagactcgatgcatctacagtggtct
actaaagaggacgatgagggtcaccgccatctgattgtttcgttcccgcctaagaataac
gacgacgacgatgaagatgatgaggaggaggaaggtaaccttgcggcttaccgagtaatg
aagacatatgacaaggctttggtcattgatttgacggccgaagatgcccagaaacagtat
gaccaactatatcaagataagtatcagggctggaagacaaagtattaccttcagaaattc
gaagagtgggctcccgacagctacgacaaggagctcacagccctctgtgagaattacgtc
caaggtttacagtgggtcttgtactactattaccgcggtattgcttcatggccttggttc
tacggataccactatgcacctcttatttcagacgttgtcaagggcgttggcgcagatctg
aacttcaaaaagggccagcctttcttgccctatgaacagcttatgggcgtcttgcctgat
agaagtaaaaagattgtccccaaggtttaccatgacctcatgacaaacccggattcaccc
atcgttgatttctatccccgagacttcgagctggacatgaacggaaagaagatggattgg
gaagcagtcatcaagattcccttcattgacgagaaacgcctgttggacgccatgaggccc
aagaacgaactgttggaacccgatgaaaaggcacgaaacggattcggcgtgcctctcaag
ttcacgtattcgcctgaagtcgacttcgtttacccttccccattgcccggtgttttcccc
gagatccaaaactgtcgctgcattgaaaacatattcgatcttcctgatgtggaagggctt
gagtacttgtcaggattgactagtggtgctttgttgaaagtcgatgctttggctggtttc
cctactctccacactctcccatatactgcccagcttgtcgaaggctatggtgtcaatgta
ttccaggcagacagcagaaacccgagcgtctgtgttaccctgaccggaacggagaatcgc
accaagattgaaacttggaaggcgaaacttggtcagcgatgttacgtgggatacccattc
ctccaggaagccaaggtcatcaaagtgcaggatgagctcttcagctatgaattggccgac
aatggggatgtcatggcaagagaccacaacaacagagaggctgctgactgggccaaggaa
gctgattacatcgaaaactggcacgctaagcgacttgcaatcaccatagggcaagtcgag
tgtctggtgtatgtccatatgctcaagggcctcattcgtacggaggagggtgctctgacc
aaggagtatgccgaaaaccccagcctcaggagtacatatgctgcacagaccatcgttgac
gaagtggtcaatgaagacgaacgattcatcgagaaggaagcattgcccattgaggaggaa
ttccctcgaggcactcgtgcgttcttccttggtgactactcttatggccgtccgctcgaa
gttgccgctcacacaggcaacaaggcggaggtcgtcgtctcagttctcaagaacaaggag
caagatttcgcaaagcaaatcatccatcaggccgaacgctccaatccttataccccatca
tttgctgttgctaagcagctgggtatccatcctctcgttctgagcaagatcacttcttcg
taccagatcattaactctgccggactacgactgaacttgggactgaacttgaagtttgaa
ggccgaaagctcaaggtcttgggctattcgagaaagtcccatacgggttgggagttcagt
ggaatggcgatcaaattgattgctgattacatggttgccttccccgacttctttgctgcc
attcaaagagaaccacaaaagagcgacgtccttgagacagatctctggaaggatcccgcc
gtcgcttcccagagagtcaaggagatcgtggcttggctcaagaagcaggagaccagcaaa
tttgagcgtgtccctctggaagccgagcagcttgactccgagattgtcaaggccctggct
catgtcggcgaacaggttcatgctgcttcccaggagatcgagattaagaagttgcgtagc
gttcctcgctcggcgctccttaaaccgtctgatgcggaaatggtgctcggcagccagaac
tttactctgggagatcgagttacttatgtttctgctgctggtaaggttcccattgccact
cgtggaactgttgtcggtattagtcgcactgccactgccctcctcttggatgttgtctgg
gacacgtctttcatgagcggcaccacactcaacgaaagagcccctgtgttccgtggccag
acagtggcatcatcctcagtcttgaacacttcgaacaaacaggtcgtttcaacctccagt
aaatcacaacagcgaaagccagttattgctgcgcatggtggctatgcgaacgttggggtc
actcagtacagagatgcgccagcccctggccctcttcgcggggggtggagtggagcgctg
aacggcaacaactcacaaggacgtaactcccctggacgtggtcgaggtaacggtgctcgc
ggaggtgctcccaacctcatgcacagcaccttggtttaccgaaacggtcctcccaacggt
gcggctcaaggccatgatgccaacggaaacggcacccgaggtagaggaggacgtggtcgc
ggccgtggcagccaccacggttctcccgctcctgatggcgctcctcaggaacagatgtat
ggtaacgttccaccacccgctagtcttgaccaaccccgaggcagaggccgtggtagagga
cgtggaggcagaggacgcggaggacctaatcgtgggcgtggcaacggaggagctggcggt
aacggaagccagggctag
DBGET
integrated database retrieval system
