Fusarium graminearum: FGSG_06804
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Entry
FGSG_06804 CDS
T01038
Name
(RefSeq) ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
fgr
Fusarium graminearum
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_06804
03041 Spliceosome [BR:
fgr03041
]
FGSG_06804
03036 Chromosome and associated proteins [BR:
fgr03036
]
FGSG_06804
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGSG_06804
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
FGSG_06804
mRNA cycle factors
Common to processing body (P body) and stress granule
FGSG_06804
Spliceosome [BR:
fgr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
FGSG_06804
Chromosome and associated proteins [BR:
fgr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FGSG_06804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
23553919
NCBI-ProteinID:
XP_011326456
UniProt:
Q4I7K4
A0A1I9FK29
LinkDB
All DBs
Position
4:1281468..1283551
Genome browser
AA seq
675 aa
AA seq
DB search
MADQINMGGLSLNEGGHQGPPQGRSYIPPHMRGRGGPPPAGPQAGGPPVMNGGPPAAAPG
PNGIGNSAWANQNYGARQNNWSNDVPTYQGNNNRRGGWGGRGGGYSGGGNFDGHSGGGGA
PTARGSGDGQWRDGKHIPGPANPRVERELFGVTAEDPSKQHTGINFEKYDDIPVEASGTD
VPEPVHQFTTPPLDEHLCRNIELAHYKVPTPVQKYSIPIVSGGRDLMACAQTGSGKTGGF
LFPILSQAFINGPSAVPANAAGQFGRQRKAYPTSLILAPTRELVSQIFDESRKFAYRSWV
RPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDM
GFEPQIRRIVEGEDMPQVQDRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENI
TQKVEYVEDVDKRSVLLDILHSHANGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRT
QRERERALEFFRNGRCPILVATAVAARGLDIPHVTHVINYDLPTDVDDYVHRIGRTGRAG
NTGIATAFFNRGNRGIVRELMDLLKEANQEVPAFLETIARESSFGGGGRGGRSRGGGGRG
GATRDFRKFGGGGFGGNNNGGGGGFNNAGSQGAGFSAGGGGGAGYGGGAGYGGGAGYGGG
GYGNPSGPGAQSSWW
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcagatcaatatgggtggcctctccctcaacgaaggcggtcatcaaggccct
ccccagggtcgatcctacattcctcctcacatgcgtggccgcggtggtcctccccccgct
ggtccccaagctggtggtcctcccgttatgaacggtggtcctcctgctgctgctcccggt
cctaacggcatcggcaacagtgcctgggctaaccaaaactacggcgcccgccaaaacaac
tggagcaacgatgttcctacctaccagggcaacaacaaccgccgaggcggctggggcggt
cgaggtggtggctacagcggtggcggcaacttcgacggtcactctggtggtggtggcgct
cccactgcccgcggatctggtgatggacaatggcgcgatggaaagcacatccccggcccg
gccaacccccgtgtcgagcgcgagcttttcggtgttactgccgaggacccttccaagcaa
cacactggtatcaacttcgagaagtacgacgacatccctgttgaggcttccggtacagac
gttcccgagcctgttcaccagttcaccacacctcctctggacgaacacttgtgccgcaac
attgagctcgctcactacaaggtccctacacccgttcagaagtactcgatccctatcgtt
agcggcggtcgtgatctgatggcttgtgcccagaccggttccggaaagactggtggtttc
ttgttccctatcctctctcaggctttcatcaacggaccttctgccgtgcccgctaatgcc
gccggtcagtttggtcgccagcgcaaggcttaccccacctctttgattcttgcccctacc
cgtgagcttgtgtctcagatctttgacgagtcccgcaagttcgcctaccgttcttgggtg
cgaccttgtgtcgtttacggtggtgccgacattggctctcagctccgacagatcgagcgt
ggctgtgatctgcttgtcgctactcccggtcgattggtggacctcatagagcgaggtcgc
atctccctccagaacatcaagtacctcgtgctcgatgaggccgatcgcatgctggacatg
ggtttcgagccccagattcgccgcattgtcgaaggcgaagacatgccccaggttcaggac
cgccagaccctcatgttctcagccaccttcccccgcgacatccagatgcttgcccgcgat
ttcctcaaggactatatcttcctttccgtcggtcgtgtcggttccacctctgagaacatt
actcagaaggttgagtacgtcgaggatgttgacaagcgatccgtccttctggacattctc
cactcccacgccaacggtctcaccctaatctttgttgagaccaagcgcatggctgattcg
ctctccgacttcctcatcaaccagaacttccctgctacctccattcacggtgaccgtact
cagcgtgagcgtgagcgtgctctcgagttcttccgtaacggtcgatgccccatcctggtt
gctactgctgttgccgctcgaggtctggatatccctcacgtcactcacgtcatcaactac
gatctccctaccgatgtcgacgactacgtccatcgtattggtcgtactggtcgtgccgga
aacactggtattgccactgcattcttcaaccgtggcaaccgcggaattgttcgtgagctt
atggacttgctcaaggaagctaaccaagaggtccctgctttcctcgagaccatcgcccgt
gagtcttccttcggtggaggaggccgtggtggtcgctcccgtggcggcggtggtcgcggt
ggtgccactcgtgatttccgaaagtttggcggcggcggcttcggtggtaacaacaacggc
ggcggtggtggcttcaacaacgctggatctcagggtgctggcttcagcgctggtggtggt
ggtggcgctggctacggcggaggtgctggttacggtggcggagctggctatggcggcggt
ggttacggcaaccccagcggccctggtgctcagtcgtcttggtggtaa
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