Fusarium graminearum: FGSG_06855
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Entry
FGSG_06855 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
fgr
Fusarium graminearum
Pathway
fgr03013
Nucleocytoplasmic transport
fgr03015
mRNA surveillance pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_06855
09122 Translation
03013 Nucleocytoplasmic transport
FGSG_06855
03015 mRNA surveillance pathway
FGSG_06855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_06855
03041 Spliceosome [BR:
fgr03041
]
FGSG_06855
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FGSG_06855
TREX complex
FGSG_06855
Spliceosome [BR:
fgr03041
]
Complex C
Other components
EJC/TREX
FGSG_06855
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FGSG_06855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
23553964
NCBI-ProteinID:
XP_011326510
LinkDB
All DBs
Position
4:complement(1450674..>1452444)
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AA seq
336 aa
AA seq
DB search
MADKMDRGLDEIIADTRSNRPRNNRGQGRRREPRNDFPRDGVRKVDFPRSPMMPTRPSVR
DDSRNIDSEWVHDRFEENNNRRAPAPRRRRESPEQDSKGTKIRVDNIHYDLTDDDLSELF
QRIGPISRLQLRYDRAGRSEGTAYVTYERNEDAKAAILEFDRANANGQPIYLTLLPSRNP
FDTAVMPGRSLAERISSPGDRRSHSPHRQRDDDDAARRGIDRYVPGQGSRRSPMPRGRGQ
GQGQGRGQGGRRPGARRDGREGGREGGRDQEGGRGGRGNRPSKKTQEELDAEMADYFGGD
SAPAEAANQQDAPPAQAPAAAQPQVHAAADDIDMIE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggaccgcggtcttgatgagatcattgctgatactcgctccaatcga
cctcgcaacaaccgtggccaaggtcgccgacgtgaaccgcgtaacgatttccctcgcgat
ggtgttagaaaggtggacttccctcgctctccaatgatgcctactcgaccttctgttcgc
gacgattcacgaaacatcgacagtgaatgggtccacgaccgattcgaagagaataacaac
cgccgggcacctgctcctcgccgccgccgcgagtcaccggaacaagattccaagggcaca
aagatccgcgtcgataacatccattacgacctcaccgacgatgatctttctgagctcttc
caaagaattgggcccatcagccgcctccagctacgatatgatcgcgctggacgatctgag
ggcactgcctacgtgacctacgaacggaacgaagacgccaaggcagcgatcctagaattc
gatcgtgcaaatgccaacggccagcctatttatttgactcttctgcccagccgaaaccca
ttcgatactgccgttatgcccggccgttcacttgcagagcgcatttccagcccaggagac
agaagatcgcattcgccccaccgccaacgtgatgatgatgatgctgcccgcagaggaatt
gaccgatatgttcctggccaaggctctcgtcgaagcccaatgcctcgaggccgtggtcag
ggtcaaggccaaggtcggggccagggtggtcgccgtcctggtgctcggcgtgatggcaga
gaaggaggtagagagggaggcagagatcaggagggtggccgaggtggccgaggcaaccgt
ccttccaagaagacacaagaggaactcgacgctgagatggccgattactttggcggagac
agcgcgcccgcagaggccgctaaccagcaagatgcacctcctgctcaagcacctgcagct
gcgcagcctcaagtacacgctgccgccgacgacatcgacatgattgagtaa
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