Fusarium graminearum: FGSG_06907
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Entry
FGSG_06907 CDS
T01038
Name
(RefSeq) cleavage and polyadenylation specificity factor 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
fgr
Fusarium graminearum
Pathway
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FGSG_06907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_06907
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
FGSG_06907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
23554011
NCBI-ProteinID:
XP_011326573
UniProt:
I1RS03
LinkDB
All DBs
Position
4:<1644148..>1644992
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AA seq
264 aa
AA seq
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MSTITPDALQSGQAPVIPLSFNGNQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLE
EHYTEHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEIQGFKSRLDER
LAPVGRLGEGEEAGDWQVGDCLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKQK
VLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSRYNFEFVDENGNVVAATPGSAAP
DGYVPHVKVLAGDDTDMKEENGTS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgataacccccgatgcgcttcagtcgggacaagctcccgtgattcccttatcc
ttcaacggtaaccaacctgagaaggttacgctctacccgctttccaactacacattcggc
gtcaaggagactcagcccgaggaggacccatcagttattgctcgtctcaagcgactcgag
gagcactacacggagcatggcatgcgccgtacgtgtgaaggcattcttgtctgtcatgaa
cacaaccacccgcatattctgatgctacaaattgccaatgccttctttaagctgcccggc
gattacctacgccccgaggatgacgaaattcaaggtttcaagtcgcgactcgatgagaga
ttggcgcctgttggccgtttgggagagggtgaggaagctggtgactggcaagtaggcgac
tgcttagcccagtggtggaggcccaactttgaaactttcatgtatccgttcatcccggcg
catgtgacgagaccgaaggagtgcaaaaagctctacttcattcaactgcccaagcaaaag
gttttgagcgtccctaagaacatgaagctacttgccgttcctctcttcgagctctacgac
aacactgcgcgatacggcccccaactttctgcgattcctcatctactgagccgatacaac
tttgagttcgtggatgagaatggtaatgttgtcgctgcgactccgggctccgccgcacca
gacggctacgtgccgcacgtaaaagtactggcaggcgacgacacggatatgaaggaggaa
aatggaacaagctga
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