Fusarium graminearum: FGSG_07245
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Entry
FGSG_07245 CDS
T01038
Name
(RefSeq) pre-mRNA-splicing factor rse-1
KO
K12830
splicing factor 3B subunit 3
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_07245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgr03021
]
FGSG_07245
03041 Spliceosome [BR:
fgr03041
]
FGSG_07245
03036 Chromosome and associated proteins [BR:
fgr03036
]
FGSG_07245
Transcription machinery [BR:
fgr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
FGSG_07245
Spliceosome [BR:
fgr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
FGSG_07245
Complex B
FGSG_07245
Complex C
U2 SnRNP specific factors
FGSG_07245
Chromosome and associated proteins [BR:
fgr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
FGSG_07245
TFTC complex
FGSG_07245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
23554332
NCBI-ProteinID:
XP_011326983
UniProt:
I1RSW0
LinkDB
All DBs
Position
4:<2884850..>2888856
Genome browser
AA seq
1220 aa
AA seq
DB search
MATTSNMFLYSLTVQPPTNVTQAVLGQFAGTREQLIITGAGSQLSLLRPDPSQGKVITLL
SHDVFGIIRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFQRLHLETFGKSGVRR
VIPGEYLACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALD
VGYSNPVFAALEIDYSEVDQDSTGQAMEELDTQLVYYELDLGLNHVVRKWSDPVDPTASI
LFQVPGGNDGPSGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKL
KGNTGAFFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSG
FLYVATQFGNYSFYQFEKLGDDDEELEFYSDDFPADPKASYEPVYFHPRPTENLALVESI
PAMNPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWT
LKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHP
KGIRHIRNGNVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKE
MFGTVTCLSLGDVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAI
IAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQGKT
CVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRETQAN
TRRIFNIDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLADPG
VVNGDSRVLPPEDFGYPKGTRRWASCINVIDPLSEEGQVLQTIDLENNEAAVSAAIVPFS
SQDNESFLVIGTGKDMVVNPRSFSEGYLHIYRFLEGGRELEFIHKTKVEEPPLALLAFQG
RVLVAVGTSLRIYDLGMRQMLRKSQAEVATQQIVSLNTQGSRIIVGDVQQGVTYVVYKPA
SNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQSGLHLIN
ARDYLHGTPHRVSLMCHFYTQDIPTSITKASLVVGGQEVLLWSGIMGTIGVFIPFVSRED
ADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGVIDGDLCERYNLLPNDKKQMIAGEL
DRSVREIERKISDIRTRSAF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacttcaaacatgtttttatactcgcttacggtccagcctccgacaaatgtt
acacaggcggtcctgggtcagttcgcaggcactagggaacagctcatcatcactggtgct
ggctcgcaactctcactgctacgacctgatccctcgcagggaaaggtgattaccctcctc
tctcatgatgtctttggcatcattcgttcccttgccgccttccggttagctggcagcaat
aaggattacttgatcattgcttctgactctggtcggatcacaattattgagtatctccca
gcccagaaccgcttccagcgactacatcttgaaacatttggaaagtctggcgtaagaaga
gttattcctggcgagtatcttgcttgcgacccaaagggccgagcttgtttaattgcctca
actgagaagaacaagctcgtgtatgttttgaaccgaaattcacaagccgagcttacgatc
tcgtcgcctctcgaggcccacaagcctggtgttcttgtcatctctatggtcgcacttgac
gttggctactcgaatcctgttttcgccgcgctcgagattgactactcagaggttgaccaa
gattcaacaggccaagcaatggaagagctagatactcaacttgtctattacgagcttgat
ctaggacttaaccacgtggttcgaaagtggtcagatcccgtcgaccctacagcctcaata
ctgtttcaagttccgggtggtaatgacggtccaagcggtgtgttggtatgcggtgaggaa
aacatcacatatcgacactcaaatcaagaggccttccgcgttgccattcctcgtcgtcgc
ggtgctacagaagatcccaaccgcaaacgcactattgtctctggcattatgcacaagctg
aagggcaatacgggtgctttcttcttcttgttgcaaacagatgatggtgatcttttcaag
ctttctatcgacatgattgaagatgaagaaggcaatccgacaggagaagtcaagaggctc
aaggtcaaatacttcgacaccgtcccggtggcatctagtctttgcatcctcaagagtgga
tttctctatgttgccacacagtttggcaactactcattctaccaatttgaaaaacttggt
gacgatgatgaggaactggaattctacagcgatgatttccccgcagaccctaaagcttcc
tacgaacctgtctatttccacccccggccaaccgaaaacttggctttggttgagagcatt
cctgccatgaacccgctattagactgcaaggtggcaaacctcactggcgaagacgcacct
caaatatataccatctgtggcaatggcccccgaagcagcttcagaatgctcaaacatggt
ttggaagtcaatgagatagttgcttctgaacttcctggaataccttccgcagtgtggaca
ctgaagctcaaccgctcggaacaatatgatgcctacattgtgttatcgtttaccaatggt
acgctggtactcagtattggagaaacggttgaggaagtcagcgactcgggcttcctcaca
agcgttcctacgttagcagctcagctgcttggtgacgatggcctgatccaagttcatcct
aaaggcattcgacatatccgtaatggaaacgttaatgaatgggcagctccacagcatcga
tctattgttgccgcaactgccaatgctcatcaagttgccgttgcccttagttctggtgag
attgtttactttgaaatggacgccgacggctcactagccgagtacgacgagaagaaggaa
atgttcggaacagtcacatgtctgagcttgggagatgttcctgaagggcgtctgagaagc
tcattccttgcagtcggctgtgatgattgcactgtccgtattctcagccttgatcccgaa
tcgactttggaaaataagtcggtgcaggctctaacagcagcccctacgtcgctggctatc
atcgctatggaagactcctcatcgggtggctctacactctatcttcacattggacttcac
tccggtgtgtatcttagaacagtcctcgacgagatcaccggtgaattaaccgacacccgc
caaaagttccttgggcccaaggaagtcaggctattccaagttactgtccagggtaagact
tgtgtacttggacttagctctagaccttggcttggctatgcggatcctatcacgaaggga
tttgttgtgacgcccctcaactacgttgatctagaatggggttggaacttcagcagtgag
caatgcgaagaaggcattgttggcatccaaggccagtcactacgcgagacacaagctaac
actcgcaggatctttaacattgatcgacttggcgagacactgatccaaaagtctattcct
ttaacttatacccccaagaagctcgtcaagcaccccgatcagcctcttttctacactatc
gaagcagacaacaacacgttaccacctgagttgagagcacaactcctcgccgaccctgga
gtcgtaaatggcgactccagggtgctcccacctgaggactttggctaccccaaaggtact
cggagatgggcatcttgcatcaacgtaattgatcccctgtctgaagaaggccaagtcttg
cagacaatagatttggagaacaacgaggcagccgtcagcgcagctattgtgccattttcc
agccaggataacgagagcttcctcgtcattggtaccggcaaagacatggttgtcaatcct
cgaagcttttcagaaggatacctccatatctaccgattcttggaagggggtcgggagctt
gagtttatccacaagaccaaggtcgaggaacccccgctggctttgctggctttccagggc
agagtccttgtagccgttggcacatcgcttcgcatatatgatttgggtatgagacaaatg
ctccgcaagtctcaggccgaggttgcaacacagcagattgtgtctttaaacacacaaggc
agtcgaatcattgtaggcgatgttcagcagggtgtcacttacgttgtttataagcctgct
tccaacaagctcatcccctttgtcgatgacacaatcgcaaggtggaccacatgtacaacc
atggtggattatgagtccgtcgccggcggcgacaagttcggtaatatgtttatcgtacgt
tgtcctgagaaggccagcgaagaggcggatgaggagcaatccggcttgcatttgatcaat
gcccgagactatctccatggcacaccacacagggtgagcttgatgtgtcatttctataca
caagacattccgaccagcatcactaaggcgagccttgtggttggtgggcaggaagttttg
ctatggagtggtattatgggcacaatcggagtttttattccattcgttagtcgtgaggat
gcggactttttccagaacctcgagcaacacctaaggacagaggaccccccactcgccgga
cgagatcatcttatgtatcgtggctactatgcccctgtcaagggagtcatcgatggtgac
ttgtgcgaacgatacaaccttctgccaaacgacaagaagcagatgattgcaggcgagttg
gaccgctcagtccgggagattgagaggaagatttctgacatccgtacacgatctgcattt
taa
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integrated database retrieval system