Fusarium graminearum: FGSG_08299
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Entry
FGSG_08299 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
fgr
Fusarium graminearum
Pathway
fgr03022
Basal transcription factors
fgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FGSG_08299
09124 Replication and repair
03420 Nucleotide excision repair
FGSG_08299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgr03021
]
FGSG_08299
03400 DNA repair and recombination proteins [BR:
fgr03400
]
FGSG_08299
Transcription machinery [BR:
fgr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FGSG_08299
DNA repair and recombination proteins [BR:
fgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FGSG_08299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
23555314
NCBI-ProteinID:
XP_011320494
UniProt:
I1RVL8
LinkDB
All DBs
Position
2:complement(<2338294..>2339833)
Genome browser
AA seq
494 aa
AA seq
DB search
MSVTPSLQLAEYLEKLPGTTFRKLYQQPSTALAIFRRMLPQLAKVFVMRILFNPKPILLS
DLDDWVKPSHKRQKDQALSVMRVLHIVQISTPSKERPQEMQLTTNFKVSLRLALSGGGSH
NSFGVPSTLQIPPEIDIDFLDRYARKKWEDILHFVVSSVGYKSAGESSGPNKSVKELLVA
GRLVDRRPSGAIGITQAGFTFLLQEANAQVWTLLLLWLEAMDVNKMAGLEATDMLSFLFV
LASMELGRAYDTNALTEQRKNMLPSLVDFGLIYIPNHKRSMFFPTRLATTLTSSSNSLRS
ISDGVAAATAAALQPGQSRAPGSSATGSSNEQRGSVIIETNYRIYAYTQSTLQIAVLALF
TKLQMRFPDMVAGRISRQSIRQAINFGITAEQIISYLSAHAHDQMRRTASLNNKPVLPPT
VVDQIRLWQLENERMKTTGGFLFKDFEDHKEYMAVAGFAEEVGVLVWRNDVKGMFFASKH
EQIRDYLRIRKKAE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcacgccttcgcttcaactcgcagagtatctcgagaagctgcccggtacgaca
tttagaaagctctaccagcagccctcgaccgctctcgccatctttcgtcgcatgctacca
cagcttgcaaaggtttttgtcatgcgcatcctcttcaacccgaaaccaatactactcagc
gacctcgacgactgggtgaaaccgagccacaagcgccaaaaggaccaggccctgtccgtc
atgcgcgtcttgcacatcgtgcaaatctccacaccctccaaggaacgaccgcaggagatg
cagctcacgaccaacttcaaagtctccctccgactcgcgctctctggtggcggctctcac
aactcattcggcgtgccgtccacactacaaatcccccccgaaatcgatattgacttcctc
gatcgctatgcccgaaagaagtgggaggacatcctgcactttgtcgtttctagcgtggga
tacaaaagcgcaggagaatcttctggaccgaataagagcgtgaaagaactcctcgtcgca
ggccgtctggtcgaccgaagacccagcggcgctattggcatcacccaggcgggattcacg
ttcctgctgcaagaggcaaatgctcaagtatggacccttttgctactctggcttgaagct
atggacgtcaacaagatggctggtctggaagctactgacatgctttcctttctctttgtc
ctcgccagcatggaacttggccgcgcctacgacacaaatgcgttaaccgagcagcgcaaa
aacatgctcccctctctcgtcgactttggtcttatatacattcccaaccacaaacgatcc
atgttcttccccactcgacttgccacgacactcacatcaagcagcaacagtctccgaagc
atcagcgacggcgtggcagccgccacagcagcagccctccaaccaggccaatcccgcgcg
ccaggaagcagcgcgacaggatccagtaatgagcagcgcggtagcgttattattgaaacc
aactaccgaatctacgcttatacgcaatccacgttgcaaatcgccgttctggcactcttc
accaaactccagatgcgcttccccgacatggtagccgggcgcatctcgcgacagtccatc
cgccaagccatcaactttggcatcacggccgagcaaatcatttcgtacctatccgcccac
gcccacgatcaaatgcgccgcacagcctcgctcaacaacaaacccgttcttccacccacg
gtagtcgatcagatccgtctatggcagctcgaaaacgaacgcatgaagacgacgggcggt
tttctgttcaaggactttgaggatcacaaggagtacatggctgtggcaggctttgcggag
gaagtgggcgttttggtgtggcgcaatgatgttaagggcatgttctttgccagcaagcat
gagcagattagggattatctgcgtatccgtaagaaggctgagtaa
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