Fusarium graminearum: FGSG_08578
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Entry
FGSG_08578 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_08578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_08578
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FGSG_08578
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
23555576
NCBI-ProteinID:
XP_011320172
UniProt:
I1RWB5
LinkDB
All DBs
Position
2:<1387913..>1388923
Genome browser
AA seq
336 aa
AA seq
DB search
MASTTGLTRSTFAKLSPHPYLLANLKPSSNDVRPARSNGRASDEVRTPTVNASSLSHANG
SAVVRVGDTTVICGVRAETILTQNIPSYRAANTETELKEYDLLVPNIELATGCAPQFLPG
GPPSTLAQTLSTRIYSLLHSSKIINPEDLRIWHTAPSEDFEAAEDRMEEDDAETVNENRS
VVAYWVLYIDIFFISFDGNPFDAAWAATMAALRDTKLPGARFDLDREMIVCSRKESRPLS
ITSIPIACTAVVFTGKETDRPTDGEFWMLVDPDRLEESLCDESVTIVVDCKNGKVNILSI
SKHGGIALTPQFLTSEQFLGWATKRWEQFNAAITQS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaacaggacttactcggtccacttttgccaaactttcaccgcatccatat
ctacttgccaacctcaagccctcctcaaacgatgtacgcccggctcgaagcaacggccga
gcatcagacgaggtccgcaccccaacagtaaacgcttcaagcttgtctcacgcaaacgga
agtgccgtggtgcgtgtgggcgacacaactgttatctgcggtgtgcgagctgagactatc
ttgacccaaaacattccgagctaccgcgctgccaataccgaaaccgagttgaaagagtac
gacctgcttgttcccaacattgagctcgctacaggatgcgcccctcaatttctccctggt
ggcccgccaagcactcttgcgcagactctcagtacacggatatactctctcctccacagc
tctaagattatcaaccccgaggacctacgaatatggcacacagcaccctcggaagacttt
gaagccgccgaggatcgcatggaagaggatgatgccgaaacagtcaacgagaaccggtct
gttgtggcttactgggtgctttacatcgatatcttcttcatttcctttgatggaaaccca
tttgatgccgcttgggctgccaccatggccgcactacgggatacaaagctccccggagct
cgtttcgatctagatcgagagatgatcgtctgctcccgcaaagaatcaaggcctctcagc
atcaccagcattccaatcgcctgcacagcagtcgtcttcactggcaaggaaaccgaccga
cccaccgacggcgagttctggatgctcgtcgatcccgatagactcgaagagtcactttgc
gacgagagtgtgacaattgtggtggattgcaagaacggcaaggtcaacatcttgtccatt
tcaaagcacggaggaattgccttgacccctcagtttctcacatcagaacaattcctgggc
tgggcgacgaagcgatgggaacagttcaacgcggccattactcagtcgtag
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